Ll_transcript_197951

• Id Trinity: FTRINITY_DN24515_c0_g1_i1
• Name Transcript: Ll_transcript_197951
• Sequence: CTGAAACATATAAAATTTGGAATGACATCATTAAAATACCTTCAGAACGTATTATTAGAATAGGTGATAAAAATAAAGAGAAATACAATTCTGAAAATTT TTGGCAAATGGGTGATACTGGTCCATGTGGTCCTTGTACTGAAATATTTTATGATTATTCAGATACAATGAAAATTGATCCAATAGAGTTTTTAGAAAAT AAAAACGGCCGTTTTGTTGAAATTTGGAATATTGTTTTTATAGAATTCAATCGTATCTCCAAGACAAAAATTATTTCTTTAAAAAATAAATCCATAGATA CAGGCATGGGATTAGAAAGAATATCTGCTGTTTTACAAAATGTGTATTCTAACTATCATATAGATGTATTTCAAAAACTAATAAAAAATATAGCCCAATT AAGCTCTATAAATAATTTAGACCATATTTCTTTTCAAGTAATAGCTGACCATATTAGATCCTGTTCATACATTATTGCAGATAATATTCTTCCATCAAAT GAACATAGAGGTTATATTTTAAGAAGAATTATCAGAAGAGCATTAAGACATG
• Tissue: flowers
• Gene name: LI_gene_4143;
• Additional information: details;

Expression of Ll_transcript_197951

FPKM

• FPAB: 0.3
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0
• LF4: 0.4
• UF1: 0
• UF2: 0
• UF3: 0
• UF4: 0

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_197951

• Blastp: Alanine--tRNA ligase from Buchnera with 100% of identity
• Blastx: Alanine--tRNA ligase from Buchnera with 100% of identity
• Eggnog: Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (By similarity)(COG0013)
• Kegg: Link to kegg annotations (BU403)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_004505726.1)
• Pfam: tRNA synthetases class II (A) (PF01411.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;