Ll_transcript_197901

• Id Trinity: FTRINITY_DN24596_c0_g1_i1
• Name Transcript: Ll_transcript_197901
• Sequence: TAAAACTTAAAAGTTTAGTTTATGAGTTATACTAATATGAAGAAATATTAATTAGCAAAGAAAGGAAGGTGAATTCAGCAAAGACAAAGATGGCATCGGT GTTACCATACAGTGATGTTGATTCCACGTTGAGGGCAATGGCCGGTCGCGCCGAGGGTTTCGGCTACCTCGCCATCGGTGGCCTCCACGGTCCTGTCTAT TCCGTCACCACCCTTTCAGATGATGGTCCTGGGTCTCTTCGCGAAGGATGTCGTAGAAAGGAGCCTCTATGGATTGTTTTTGCAGTTTCAGGCACAATTC ATCTTTCATCATATCTGAGTGTGTCATCTTATAAGACCATAGATGGCAGAGGCCAGAGGATAAAATTGACTGGAAAAGGCTTGAGGCTGAAAGAATGTGA GCACATAATTATCTGCAACCTTGAGTTTGAGGGTGGTAGGGGTCATGATGTGGATGGCATTCAAATAAAACCAAATTCTAGGCACATATGGATAGATCGA TGCAGCCTTCGTGATTATGATGATGGGCTGATAGACATTACAAGGCAAAGCACGGATATTACAGTATCTAGGTGTTACTTTGCAGAGCATGACAAGACCA TGCTGATTGGAGCTGATCCATCTCATGTTGGTGATAGATGCATCCGGGTGACTATTCATCATTGTTTCTTTGATGGAACACGGCAAAGACAACCTCGTGT GAGGTTTGGAAAAGTTCATCTATACAACAATTACACCAGAAACTGGGGAATATATGCTGTTTGTGCTAGTGTTGAGTCACAGATATACTCTCAATGCAAC ATATATGAAGCAGGAACTAAGAAAAAGACTTTTGAATTTTACACGGAGAAGGCTGCAGATAAGGAAGAGCACAAATCTGGCTTTATAATATCTGAAGGAG ACATGTTCCTGAATGGTGCTCAACCTTGCTCGCCAATGGAATACAAGGAAGAATCCATGTTCCATCCTAGTGAATATTACCCAACATGGACATTGGAAAC AGCTGCAGATTCTTTCAGGGAAATCCTCCAATTATGTACAGGTTGGCAATCCATTTCGACGCCGGTAGACCATATTGAATAAGATTCATTGTAATTGCAG GAACACATGTGGTTTATGTGTCACCATCTACAATACATTAACCAGAATTCAGAGACAATGCTTAACTTGTCACTCTTTTAATCCTACTAGTATTATCATC TTTATTGTATTCTTCAATAAAGGAATATTTATCTGAACTTTGGACTCATCTATGAATATATGCCTTCTTTTGTTATTTCCTTTCGACAATTACATTTAGG TGGTGGCCAAGCAAGACGATTATAATATGTTTCCTATGTCAAATCTATGAATATGTGCCTTTTTG
• Tissue: flowers
• Gene name: LI_gene_4186;
• Additional information: details;

Expression of Ll_transcript_197901

FPKM

• FPAB: 6.2
• FPNAB: 6.2
• LF1: 8.4
• LF2: 7.3
• LF3: 7.8
• LF4: 7.6
• UF1: 7.6
• UF2: 7.7
• UF3: 6.7
• UF4: 7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_197901

• Blastp: Probable pectate lyase 4 from Arabidopsis with 39.93% of identity
• Blastx: Probable pectate lyase 4 from Arabidopsis with 39.93% of identity
• Eggnog: pectate lyase activity(COG3866)
• Kegg: Link to kegg annotations (AT1G30350)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451142.1)
• Pfam: Pectate lyase (PF00544.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;