Ll_transcript_4696

• Id Trinity: FTRINITY_DN24666_c0_g1_i1
• Name Transcript: Ll_transcript_4696
• Sequence: AGTCATCACTAGAAAAACAAACCAAGAGTAAGGGAAACTAGTCCCCGAAGTAAAGCCCTACAAATTCAATTCATAGAAGCCCTTAAAAAAAGAAAAACAG AAAGCACCACCAAGTTGCAACGGTTTCATACACTAGTGCACGTTAGAAGCGCCGCAACAGCATAAGTTACAAAATAACCAAACATTCTCTTCAGCAACAA CAACAAAAGTAGTAGCAATGGCGAAAGGTGACGATACATTGCAGAAGAAGAAGAACAAAGCCATTAGAAAGAGGAACAATCGCTCTTCCTCCGCTCTCTC TGTCAAGGTTTCCGCCGCTATTGCCGCCAAGAAACGCCGCAAGGCCGGAAAACGCCGCCTCTGTCAGGGGATGTGCTATAGCCTGCCTACTCCAGAAGAT CCATTTAATGATCGTCATGGGAAAGAGGACTTCAAAACAAAGGGTCCTAAAAATAAGACACTTCCCAAGAAAGATGAAACGGTTCCTCTTATTGAGAAGG ATGCATCAAGAAGGAAAGGCTCACATGATGTGAAAATTTCAAAGAAATCATATCATTTAGAGAAGGAAAATGAGTCTGACAAAGCCACCGATAATCTTGG TAAAGAATCTATTATTACCTCAGAAAGTGAAAATACTGAAGAGACTGAGACGGAGGACGATCTTTGTGGTGCCCAACAGAACCATCGTGAAATTTCTGAG TTCCCTTCAAAGTTTGTTTTTTGGTGTCTAAGTTCAATTGAAAATGCATTACGAGAAGGTGATGCATACACTGATGGAGAGGGTAACTCATTGTTTGCTA ATTCATGGGGCTTAGAATTTTCCAAGTGTTATGCCACTGGGAAGGATGTGATGGAGACCAGTGGAAACTCTGCTACCAATGAGCAAATTGCATGGGTGGT TTCTGGTGCAGCTGATACTTTTGTTGGTAAAGAGCTACAAGGCGTATCATTTTCCAGTCCCTTTCTTATATTCCTTGTGCCATCCCAAGAAAAAGCTACC CAGGTCCGGAAAGTTTGTAAGCCGTTGAAATCTATTGGAATACATACAGTTAGCATACATCCAGGTGCCTCATTAGATCATCAGATTCACGGTCTGAAAA GTTGTGAGCCTGAGTTTCTTGTTTCTACTCCTGAGAGGCTTTTGGAGCTTGTGTCTTTGAAGGCCATTGATATATCTGCTGTTTCCATGCTGGTTGTCGA TGGGCTTAACGCTATTTGTAGTGCTGGCCACAGTGATACACTAAAATCTATCAAGAAGTTCATTTCTGGCAATCCTCGTCTTTTGGTTTTCAATGATTGC TTCAGCCATACATATATTGCAATGGTTCAGAATCTTCTTACAGGACCAATTTGTAGACTGTCTCTCAATAATTCAATTACCAGCCTAAGTTCATGCATTA TCCAATCTGTTGAAGTGTGTACCTCAGAAGATAAACTTGTCAAGGGCATCCAAGCCAAACATCCATTTTGGAGCAGTGGTATTCATAATTCAAAGCTGCT ATATATTTTAAGAAATGAAGTCAAGTGTGATAAGTTGGTCAAGTATCTCAAATCTAAAGGTTGTTCTATCTCACTGGACTCTGAGAGTGTGGATTCAAAC AGCAGAGTTTCTGTGGTTTACTTGGAGCATATCTCAACTACTGATATAGGAGTGTATGATGTGGTCGTTCTACCGAGTTTTGTACCTTCAATGGACAGTT ATGTCCATATTTTGACAAAGATGGCCCGCGGAAGTGTCAATGGGGTATTACACAGTTCCTTAACAAAAAGAGATACAGAACTTGCTGAACCACTGGTCGA AATTCTTGAACAATGCGGGCAGAAAGTGCCTCCTACCTTGAAAGATTTGCAGAACACATCAAAATGAGGGAAGATTGAATGTTTAAGGGTTTGATGATTA TAATCATATTACGATTGGAAACCTTATTGGATATGAAATGCTACAGCAAATGAAGAACCTCAATCATCAGAAAATTTTTGCCATATTATTTATGTTGCTT CTATTTCAAAAACTATTTCCTGTTTAAGTTGAGTGAAGGACAATGACATTTATACATCAGCAATTTGAGCTGCACAGATTAGACACATGGGGGCACGATA ATAATTTGGCACATGTATTCAATGAGGGAGCACATCTTCTGTTTACAATATGTCCCTCCATGTGTCATAAGCTGTGATTGGTTGAAGAAAGTGTCTGTGC CTGTGATGTTAGCAAGCAGAGTTGTTTAGATTAATATTTTCTTTCGAAATTTGTTTCTCTTTATCCAAACAAGAGAATGTTTTAATTTTGAATTTTTCCT GTTTGGTCCCTTTACCCTCTATAATATGCAAGTGCTGATAGCTACTTCTAGGAGTATGCTTTTGGCTTCCAAATATATTCAGGTCGTACTAAAAAAAATA CAGTGTGATAAGTTAGCATTCACTACATTTTATCTCAATTTATC
• Tissue: flowers
• Gene name: LI_gene_4219;
• Additional information: details;

Expression of Ll_transcript_4696

FPKM

• FPAB: 4.8
• FPNAB: 11.1
• LF1: 6.1
• LF2: 3.8
• LF3: 5.4
• LF4: 9.8
• UF1: 5.6
• UF2: 4.1
• UF3: 6.5
• UF4: 7.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_4696

• Blastp: Pre-mRNA-processing ATP-dependent RNA helicase prp5 from Sclerotinia with 24.76% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 14 from Oryza sativa with 24.15% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SS1G_06839)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449808.1)
• Pfam: DEAD/DEAH box helicase (PF00270.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;