Ll_transcript_216743

• Id Trinity: FTRINITY_DN25725_c0_g1_i1
• Name Transcript: Ll_transcript_216743
• Sequence: GCAAAGAGTGTATCCCTCCACGAACATTATCCAAGACACTGAATATAGAGAAGGGATAGGATTTAGGATATAGCACATTGCAAAAGAGAGCAACAACAAT GGCACTGTTATGTGGTTCAACTTCTTTAACCTTCCCTTCAACTTCTCTCTCTTCTCAATTCAAGAATGCTACTTCTAAATCTTCTTCCTTTTCCTCCTTC CATTTCTCACTACCAAATCTTTCATTATCATCTTCTTCTTCGCTTTCTTATTCTTTTCAGACCCAGTTCCCTTCCACAAATTTCTCTCTCCATTCCCAGC TTCAGGAACAAGAACCCGAACTAGAACTGGAACAGGAAGAAGAAGAAGAAGTAGAAAATGACCCACGTTTCATGTGCGTCGAACCCGAACCTCGATTCAG TGGCCCGGATATTTGGAACACAACCTGGTATCCAAAAGCTGCAGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTT GGAAGGCTCGCGTCAACGATTGCTATTCATATCAGAGGAAAAAATCTAGCAACCTTTACTCCCAGTGTTGACATGGGTGCATTTGTAATTGTGGTGAATG CAGAAAAGGTTGCTGTATCTGGGAAAAAGAGGACCCAAAAGGTTTACCGGAGGCACTCTGGACGACCAGGTGGAATGACAGTAGAGACATTTGCCCAGCT GCAGAACAGGATTCCAGAAAGAATTATTGAGCACGCTGTTCGTGGCATGCTTCCTAAAGGAAGGCTTGGCAGAAGACTATTCACCCACCTGAAGGTCTAC AAGGGCCCAGAGCATCCTCATGCAGCGCAGAAACCCATTGACTTGCCTATAAAGGATAAGAGAATACAGTTGGTGAGATAGGTTTGTAACTGAGACCATG GAATGAAATATAACAGGCATAGATTATTGTCTTATATCCATTTCAAAGAACTTTGAGTTTCTTGCTTTGACTGCTACCTTGCTCAGCATTTGATGTTTCT ATTGTCTGTAGATGTATTTGATTATTGTCTTGCTTGTTTTTATTGAGGCCCTTTTGGTTTGAGTCTTAGATATGGAATGTTTTAATAGTATGCTTTCAAG TTTATGGCAACATTTACATTTGAAGGAAATCTTTCGTTCCTTTTAAA
• Tissue: flowers
• Gene name: LI_gene_4713;
• Additional information: details;

Expression of Ll_transcript_216743

FPKM

• FPAB: 37.3
• FPNAB: 56.9
• LF1: 104
• LF2: 97.4
• LF3: 68
• LF4: 67.7
• UF1: 110.5
• UF2: 101.6
• UF3: 64.2
• UF4: 70.9

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_216743

• Blastp: 50S ribosomal protein L13, chloroplastic from Arabidopsis with 82.18% of identity
• Blastx: 50S ribosomal protein L13, chloroplastic from Arabidopsis with 84.02% of identity
• Eggnog: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)(COG0102)
• Kegg: Link to kegg annotations (AT1G78630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413784.1)
• Pfam: Ribosomal protein L13 (PF00572.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;