Ll_transcript_69754

Id TrinityFTRINITY_DN32235_c0_g1_i1
Name TranscriptLl_transcript_69754
SequenceGTTCGCCGTGGTGATTTATTTCCAAGGTTTCCGCGTTGATCTACCGATAAAATCCACCAAATACCGCGGGCAGGCTATGAGCTACCCCATCAAGCTGTTC TACACATCCAATATGCCTATTATTCTGCAATCCGCTTTGGTGTCCAACTTGTACGTCATCTCGCAGATGTTGGCCAATAACTTCCAAGGGAATTTCATTA TCAACTTATTGGGCAAATGGGGGGAGGG BLAST
Tissueflowers
Gene nameLI_gene_6529; 
Additional information-

Expression of Ll_transcript_69754

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_69754

Blastp-
BlastxProtein transport protein Sec61 subunit alpha isoform 2 from Pongo with 81.33% of identity
EggnogThe central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (By similarity)(COG0201)
KeggLink to kegg annotations (100174115)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_004491760.1)
Pfam-
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;