| Id Trinity | FTRINITY_DN34400_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_109754 |
| Sequence | GTCGTGGTGGCCGTCATGGACCTCAAAAAGGCAAAGATGTTGTTCATCAATTAAGTGTTTCTCTTGAGGATCTTTACAATGGCTGTGTACGAAAATTAGC ATTAGAAAAAAATGTTATTTGTGACAAATGTGAAGGTAGAGGTGGTAAAAAAGGAGCAGTAGAGCAATGTCCAGGATGTCAAGGCAGTGGAATTCAAGTG CAAATTCATCAGTTGGGACCTGGTATGATACAACAAGTACAGTCTATGTGCAGTGAATGTCGTGGACAGGGTGAACGCATCAATCCCAAAGATAGATGTA GGAATTGTAATGGAAAAAAGGTTACTCGTGAAAGGAAGATTTTGGAAGTAAATGTAGACAAGGGCATGGTTGATGGACAAAAAATAACATTTAATGGAGA AGGTGATCAAGAACCTGGACTTGAACCTGGTGATATAATTATTGTATTGGATGAAAAAGAACATCGTTTATATAAGAGAAGCGGAAGTGATTTGATTCTT CGCTTAGAAATTGAATTAGTTGAAGCATTGTGTGGATTTCAGAAAGTCGTAAAGACTTTAGATGAACGTTCTTTGGTTATTACTGCTGTAGCCGGTGAAG TTTTGAAACACGGTGATGTCAAATGTGTAGTTGGTGAGGGTATGCCACAGTATAAGAACCCATTTGAAAAAGGTCGTATGATTATTCAGTTCCTGGTTAA TTTCCCTGAAAGTTTATCACCTGCAAAGGTGCCTCTGCTTGAATCGTGCCTTCCTCCAAGACCGGTTGAAACTATTCCGGAGAATTCTGAAGAAGTATCG CTTGTAGAGATGGATCCAGAATATGACTCTAGGAGACAATCTAGACGTGAGGCTTACAATGATGAAGATGGACCCACCCGAAATGTTCAATGTGCTTCAC ACTAATGTTTTTTCACTTTTAAAAGTCCATATATTATACAGTACAGAGTTATTTGTACTCATTCCGTAATAAGACACCGAGCAAACAAAATTTGATAATC TGTGTAAAAAATTAGACTTCTGATACAGTATTTCTTTCCTAATATATTTACTCTTTTTTTTATTTTATTCAAAAGTTAAAGGATACATTTAATTTAATTG CTTTCTGCTGATCAATACATTAGTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_7241; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_109754
| Blastp | DnaJ homolog subfamily A member 1 from Pongo with 63.39% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily A member 1 from Pongo with 63.39% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (100174139) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453819.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |