Id Trinity | FTRINITY_DN34541_c0_g1_i1 |
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Name Transcript | Ll_transcript_175614 |
Sequence | CAACACTTGTTATATGCACTTGTCAATTTAGTAATTAATGTCAACAGATTGGATCTAGTGTCAAATTATTTAATATTTTTAAAAATGTTAAATACACTGC GTTCTGTATGCCATGGAGTGGGAAGAACACTAGGCCTAAGAACCCTTCAGACCACTTCAAGTTTGCAGCATGACAGCCTTTTTGTGCACAGGGATAGCCC TGAAGATAATGTCGATATGAAATTTGAATTTACTCCTGATAACAAAAAGAGAGTAGAAGCTCTACTAGCAATTTATCCAGAAGGACACAAGAGAGCAGCA ATGATTCCCTTACTTGATTTGGCTCAAAGGCAACATGGCTGGTTGCCTATCTCAGCTATGCATACGGTTGCTGACATTTTAAAACTTCCTAAAATGAGAG TTTATGAAGTGGCCACCTTTTACACCATGTTTATGAGGAAACCAACTGGTAAATACCATTTGCAAATTTGCACAACAACCCCATGTTGGCTAAGAGGATC CGATGAAATTCTTGAAAAAATTAAACAAGATTTAGGTTTGGAAGTTGGAGGCACCACTGCCGATGGCATGTTTACTTTGTCTGAAGTTGAATGTCTGGGA GCCTGTGTTAATGCTCCCATGGTTCAAATTAATGACGATTATTATGAAGATTTAACTGTTCAAGATACAGAAAATATTTTAAATGATTTAAAATGTGGTA ATAAACCGCAAGCTGGTCCAAGAAATGGAAGATTTGCAGCTGAACCTATTGGGCCACCAACTTCTTTAAAAGGAGATCCACCAGGTCCTGG BLAST |
Tissue | flowers |
Gene name | LI_gene_7296; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_175614
Blastp | Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial from Caenorhabditis with 67.65% of identity |
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Blastx | Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial from Caenorhabditis with 67.32% of identity |
Eggnog | Nadh dehydrogenase(COG1905) |
Kegg | Link to kegg annotations (CELE_F53F4.10) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014501872.1) |
Pfam | Thioredoxin-like [2Fe-2S] ferredoxin (PF01257.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |