Id Trinity | FTRINITY_DN41296_c0_g1_i2 |
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Name Transcript | Ll_transcript_169322 |
Sequence | CAAAGAAATACCACAAATGCCTGATGAACAACAAAGCTGGATGTCATTTTTATCAAAAGCTGTTACTGCATCAGCTAATTATTTACCGACTCAAGTAACA GATGTGTTCAACCAGGGACGAGCAGTAGCTTCAATCCATCTACCCTTTCAGGGACTAAAAAATATTTGTACAATAGTGATGGTTGACAAAGTTTTAAGGT TACTGGTTGCTTCATCCCATGGGTATTTATATGTTTATAATTTAGATATGGAAGAGGGTGGCGAATGTACTCTTTGGCGTACTCATAGGTTGGATGGCCA ATTAGATGTAGTGGATAGCCCTAAACCAATCAAATTGAAGGAGGTCAATACAACCAAGTTGGATAAAACCACGAAAACAGAATCCACCATCAATAAAAAA TTAGATGCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_9468; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_169322
Blastp | WD repeat domain phosphoinositide-interacting protein 2 from Mus with 53.85% of identity |
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Blastx | WD repeat domain phosphoinositide-interacting protein 2 from Mus with 53.85% of identity |
Eggnog | The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Necessary for proper vacuole morphology. Plays an important role in osmotically-induced vacuole fragmentation. Required for cytoplasm to vacuole transport (Cvt) vesicle formation, pexophagy and starvation-induced autophagy. Involved in correct atg9 trafficking to the pre-autophagosomal structure. Might also be involved in premeiotic DNA replication (By similarity)(ENOG410XP6Y) |
Kegg | Link to kegg annotations (74781) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445933.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |