| Id Trinity | FTRINITY_DN42030_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_170125 |
| Sequence | AAAATCTCAAACTCAAACGTTAATGTCCTCTTCCAACATCTTTTGTTCTTGTTTTTGTCTTTGTTCTTCTTTTGACCCATGGAAGATGAACCATTACTCA CCACTTCTCAAACCATTCAACACCATGATCTACCCTTTTATGCTTCTAAATCCTTCAATGATGTTACCACCTTACAAAAACCACCACAACTCTCAGAAAT TCAACCCATCATTCAACAACAAAAACAACAACACCCAATGAATCAAAATAAGATTTTTAAGAAGAAACTTGGTCGTCCAAAATCTGCTCCTTCTATATTT TCAATGCCTGAACTCAAACCAAAGTCAAAACAACACTCTAAACCTGATTCATCTAGTTCAATTATAAGACAAGGCATTTGTTTACTTGTTATATATCTTT GTTTTGGTGTTGCAATATATTCCTTCAACACAGAACATTTTTCAGGGATTGAAACACACCCTATAATTGATGCACTTTATTTTTGTATTGTTACTATGTG TACCATAGGTTATGGTGATATAGCACCTTTGACCCCAGTTACTAAAGTTTTTGCTTGTGTTTTTGTGTTGGTGGGGTTTGGTTTTATTGATATACTCCTT AGTGGGCTTGTTAACTATGTTCTGGATTTGCAAGAGGGTATGATTTTAACAGGGTTAGAAATGAGTGCTCCAATAAGAACTAGAACAAAGGAAGGTTTTT CTGCAAGGAATTACATTGTTGATGTGGCAAAAGGGAGGATGAGGATTAGGTTAAAAGTTGGTTTGGCACTTTGTGTTGTTGTGATGTGTATCGGGATTGG GAGTTTTGTGTTGTATTTTGTTGAGGGTTTGGATTTGGTTGATTCTGTTTACTTATCGGTTATGTCTGTTACAACTGTTGGGTATGGTGATAGAGCCTTT AAGACCCCTCCGGGGAGGTTATTTGCAGCTATTTGGCTGCTGTTTTCGACGTTGATGGTGGCGAGAGCGTTCTTGTATTTGGCCGAGGCTAGAATTGATA GGAGGCATAGGAGAATGGCCAAGAAGGTTTTGCATAGAGAAATCACTGTTGAGGATTTGCTTGCTGCAGATATCAACAACACTGGTTTCATTAGGTAACT TTCTTTTCCCATTGTTTAGGTCAGATCTATCTTTCGCTGTTTTTGTTCAGTCAATTGATAATTTGTCATCCTAATTTACTCTGCCTATTAGGATTAAGGA AAACATTTTTCGAGCTACTGGATGAGACACCTGTGAGTGTGAGTAGGTATCGAGTTATCCCGTATTTTGAAGTAGAGTGGACATATTGTATCCGAATGTG AGTGTGAGCATTGTCTTAAGTGTCGATAACAGTTGTGCAAATAGTAAATTAGTATAAGGAAGTAGCATGGTTTTAAATTGTGGTCCACGACCACAATTTC GGCTTTTATATTGCAGTTTTGGGAGCATCTACATGCTGTAATTGTGGTCTTATTTTCCCTCAAATTCGGTAAATGTAACGTAACTACAATTGTGACCGCA GACCTGCTTTAAACCATTAAGTAGTAAGAGTGATGTTGACTATTGAGTAATTAGTAGATTAAAAGCACCTCGAGGCTAAGTTGTAAGGAGCCTGAACCTG ATAGCAATTTCGGGCATCTAATTTATGCAGGAAAGCATCTAATATAAGTAGTAAGAGTGTTGTCGAGTATTGATTCTAGTTGTTCAAATTGTGAAGCTGT ATGAGCAGTAAGAGTATTGACTACTGAGCATGATTTTAAACTGCGATTTATGTTAAACTTTCCGCAATTACGGACTACTCCGGGAAAATACGGCTATCAC AATTGTGGCTTTTACGCTGTTCTGAAGACTACTAAAACCATATATTCGTTGCCTCAATTGTTGCAGCAGACCTATATTCAAAAACCTTGATATTGAGTAC TAAGTAGATTAAAAGGACCCCAAAGGCTTCTTTGTAAGGAGCCCAACCCTGATAGCAATTCTGTTCATCTGATCTAACCCGGAAAATAGCTCCTCATATT ATAAAAATACTCTTAGAGTTTGTCTGCCATAAATAGGATATGCTAATCAAGTATCATGCTGCTCAAGATAATGAATTACGACTAGCTATCATTATTTGTT GCTTATATAGAGCATCTGTCATGCGTCATGGATTCTCGATACGAGCCGAAAAAACATTGACTAAAGAAATCGTTAGTCATAAGCAAGCGTAATTATATTT TGTTTAGTACATCATGACAATGCATGGTTTATATATACTTTTCTTGTTTATTTTATAAGCCTATCATCTCTTGATGTCACTTTTTGGATTTAGTGTGCAT TATGCATAGTATATACATATAAGGGCAGAAAGTGTGAGGTATCAATAATGTATGCAATGCATTATGCAAGTATTTTATGTGATTCACATTATTTTAAATG GTTAACTTTACCAAGTTGATTTTTTTTAAGATTATTTCTCAACCAAAGTTTTTCTTCTGCTCTTGCTTTGTTTCAGTAAATCTGAGTATGTAATTTTCAA GCTGAAGGAGATGGGTAAAATACAGGAAAAAGATATATTGCAAATATGTAACGAATTCAGGAGGATCGACCCGACAAACTGCGGGAAGATAACACTACGC CATCTCATGGAGGGCACATGACAGAGTAAAAGTAAGTCAGATGATAGTTTCAGCTAAGAAATTGGTAAGGCATTAACTATGCACAAGGAAGAAGATTGAG AAGTAGATAGTTCTCATCCCTGCAAAATGTATAGGATAAATATAAATATTTTTTAAACCTGTCTTGTAGCTGTAGGAATGTGAGTAATTGAATTATTTGG AGTAACATTTTCTGGAGAACGAGTTCTGTTCCGTTCTCGCGAAATGTCAAGTTTCATATCGGTTAAGTATACGGTGTCAACTTAGTTATTCTAATATAGT ATCAGAGTCTATATCGATGTTGGCCACCCGTAACTATTTCACTGATGGGAGATGGAAAATAAACACCAATTTGGGAATCATGTGTAAATGACATTATTTC TTACTATTTTATTGAATTTATAGAGACTAACTTGTAAATGGAATCTTTAGAGAGCTTAATGTTGATTACATGCTAGATATCAAACTTCAACCATTGATAA TAGTTTCCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_10104; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_170125
| Blastp | Two-pore potassium channel 5 from Arabidopsis with 62.62% of identity |
|---|---|
| Blastx | Two-pore potassium channel 5 from Arabidopsis with 67.99% of identity |
| Eggnog | PotAssium voltage-gated channel(COG1226) |
| Kegg | Link to kegg annotations (AT4G01840) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440666.1) |
| Pfam | Ion channel (PF07885.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |