| Id Trinity | FTRINITY_DN42233_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_107920 |
| Sequence | AAAGAACCGAAATGCAATGCAACACTTCTTACTCTTGTTCTATTTTATTGTTATACCCACAAACAACATTAAAACGATGTTGTTTTCAACCAAACACTAT TTCAGTTACTTCACAATCTCAACAACAAGAATCCAAACTTGGTTATGATTCTGAGAATCTTGAAAATGAACCACCCAAATTCATAACTAGTGTTTCAAAC CCATTTGTGAAGCACTGTGTCAAACTCCGTAATACTTCTTCTTATCGCCGCTCTCATGCTTCTGCTCTTGTTATTGGTTCTATACCTATCAGAGAAATCT ACAGGTTTCAAGAGTCATTGCAAGATGAAACTGCTAGAATGAGTTGTTTAATTATTCCTGATAAAGCTGAAATTCCTGATGGATTGGATAAATCGGCTGC TTCTATAGTGCGTGTGAGCTCCGTAGTGATGAGGAAACTTTCAGCACTGCAGTCAACTGACTCTGTTGATGCAATTGCCCTCATGAAAATTCCTGCCAGT TTTTTGGGTGAAGAAGGCAATCTAAAGAAAGCAGACTTCCCGAAGTGGTTTCCATTGGCACAGCGGATTTTAGTCCTTGATGGGATTCAGGATCCTGGTA ACCTCGGCACGTTACTCAGATCTGCCGTGGCCTTTAGATGGGATGGAGTTTTCCTTCTTCCTGGCTGCTGTGATCCATTCAATGACAAAGCTCTCCGAGC TAGCCGAGGTGCCTCCTTTCAGCTCCCTATAGTTTCTGGAAGTTGGAATCATCTTGAGGCCTTGAAAGAAGAATTTCAAATGAAGTTGCTTGCTGGGCAT CCAGATCATGAAGGGTTAGGGAAGCGAGTTTGTTCGCTTACTCCAACCTTCTGTGATTCTGTATCAGACACGCCATTGTGCTTGATTTTAGGCAGTGAAG GAAGTGGACTTTCAGAAAAGTCCCTTCAGGCATGTGAGCTTGTGAGCATTGCAATGGCCGGAGAATACGAGTCACTCAATGTCTCAGTTGCCGGTGGAAT TTTCTTGTACATGCTACAGCCAAAGAATAGATGATCAGATTCTATATTTTTTCGGAACATGTTGGATTCTTGTATGTTCTCATTTAAGTTCAATTCGTTT GGGACAAAGGAGGGCAACATGCAACATGCAACATGTACATGTCCAATGATTTGTGTCCTCATCCAAGAGCAAATCTTGCACAGGTAGAATTAATGTTTAT TGAGTTCCATGTGGATTCTTTCTCTTGTTGCAACTTGCAAGTGTAGCTTTATAACATTATTGTCTTGCTTGTTTCTGAACATCTTTGGATCATGGTCTTT AAAGTGTTTTCAAACTTAAGTGGTCGAGTGTTGCCCCTTTACTTGAATGAATTTTTCTGAATTACATGCCCTTGTTTAGTAGGTGTGCCTCCAAGCAATT GTAAAGTTACTGTTTATTGACCAAAATATCATGTTTACAGATACTGGAAGTGGTAAGGTTACATATATTTACCTTCTCCGAAATTCACAATGTGGAAATC TTATACATTGGATCCACCCTTTGTGTGATTTGAATTTTATTCTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_10260; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_107920
| Blastp | Uncharacterized tRNA/rRNA methyltransferase YsgA from Bacillus with 34.38% of identity |
|---|---|
| Blastx | Uncharacterized tRNA/rRNA methyltransferase YsgA from Bacillus with 30.82% of identity |
| Eggnog | Methyltransferase(COG0566) |
| Kegg | Link to kegg annotations (BSU28650) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423556.1) |
| Pfam | SpoU rRNA Methylase family (PF00588.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |