| Id Trinity | FTRINITY_DN42341_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_46002 |
| Sequence | GCGCATTTTGAGATTTTTCTCACAAAATATAAAGCTCATAGAAAATCTATTATATCACTTCTCTCAGGTGTGTTGAAAAAACTCCCAAAATCGAGTTAGG TCTTCACAAAGAACCATAAACTATGAATCCATTGACGCTGGTGAAACGAATTCAGAACATAAACTCAAAAGAAGCAGCACTTGGTATCGGCGAAGAAGCT TCATGGCACTCCAAATACAAAGATTCCGCTTACATTTTCATCGGCGGCATTCCCTTCGATCTCACTGAAGGTGATCTCATCGCTGTTTTCGCTCAATACG GTGAAGTCGTTGATGTTAATCTCGTCAGAGATAAAGGTACCGGAAAATCTAAAGGTTTTGCATTCATTGCATATGAAGATCAAAGAAGCACGACTCTCGC CGTTGATAATCTGAACGGAGCACAGATTTTAGGGAGGATAATTAGGGTTGATCATGTGGATAAGTATAAGAAGAAGGAAGAGGAGGATGAAGAGACGGAG CGACAGAAAAGGGAGGCTCGTGGTGTTTGTCGAGCTTTCCAAAGAGGCGAATGTACTCGTGGAGCCGGATGCAAGTTTTCTCATGATGAACAAAGAGCTG CAAACACTGGTTGGGGTCAGGAGGATAACAGTTCAAAATGGGCTAATGACAAATTTGACGGTGCCAAAAAAGAGAGAATACCTGTCAACAAGCAATCAAA TCGTATTTCAGAAACTAGAGACAGAGATTCACGCTCCAGAGCCCATGACAATGAGAGGGGGTTAGTCAGCCAACCCAAGCGAAGTGATAGGAGAGAGGAG ATGTTGCAGAGGCAGGATGACAATGATTTATTTGAGGGTAGAGAAAATAATACTAGAAGGGAAGAAAAGAAATCAAGAAGGCATGAAGATGATGAATTTG AACGCAGGTCAAGAGAAGATCAACATAGGAGAGAAGAAAAAAGGTCAAGGAGGAATGATTATGATGATATGGAACCGGACCCAAGAGCTCATCACAGGAG GGAAGACAAGAGTTCAAGAAAGCCAGTTGATGTTGAGTTTGAACCTAAGTCTAGAGATTATGATACAAGGGAGGATAAAAGACCCAGGAGGCAGGATGAT GATGATTTTGGACATAGATCAAGAGAAGCTCAAGTTAACCGGGAAGAAAGGAGATCAAGAAAGCACAATGAAGATGAATCTGTACCAAGGTCAAAAGAAG ATGATGATATGAAGCAAGATAGCAGATCATATAGAACTTATCAATCAGAGTCAAAAGTAAGATACGACGATGCGAGAGAAGGGAAGAGGTCAAGAAGGTA AAGGCATTGTTTGAGGCCTGGGGTATGGGCATCCCCACCTTCCTGTCATTTAGAGAAATGAATATTAGAGTAAGCTGAACATGTGATAACCTGTAATTTG ATTAAGTGCTTATATTATTTCCAAGGTTATTTTTGTTTGTTTCATATTGATTGCTTCAATTGGGCTATGATAGCAGTGATCAATGTCATTTGGAATGTTG AGTTTATCAACTATTTTGGTTTTTAATGGTCTCTTACAACCACTGTTAAATCATGAATTTGTTGTCAGCTTATATCTCCAGTTTTTCTGCAAGCTAGCAA AGACTAAGAGCAAAATAGCTTTGGAGTATCGTAAGTGCCTAATTTTTACATATCTGGTCTATAGAATACCAAATTATGTAGCTTTGTGCGTTATTCTGGG AACTTGAACATACATTCTTAAATAGCTTATAAAAAGTTTCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_10371; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_46002
| Blastp | Zinc finger CCCH domain-containing protein 42 from Arabidopsis with 78.09% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 42 from Arabidopsis with 78.09% of identity |
| Eggnog | RNA binding motif protein X-linked 2(ENOG4111KW0) |
| Kegg | Link to kegg annotations (AT3G47120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431841.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |