Ll_transcript_46050

• Id Trinity: FTRINITY_DN42376_c0_g1_i1
• Name Transcript: Ll_transcript_46050
• Sequence: AGAATATATAGAGTTGGAAATGAACTAAAACTAAAACCCTATCTAAACCCTCGTCTCTTTCTTCTCTAGCAACAACAACAATGTCAATGTCGTTGTTTCT GAGACTCAGAAGAAACCAAAGTCTTATTCGAACCCTTCCTCACTTCCGTACAATCTTCTCTTCTTCAACAACGAAGGTTCTAGAAACTTTCAACGAAGAA TTTGAAATCGGTTCACGCTTGTTCACTCTCGAAACTGGTAAGATCGCGCGTTTCGCTAACGGCGCTGTCGTTTTAGGAATCGATCAAACCAAAGTTCTTT CCACTGTTTGTTCTTCCAAAGGAGATGCTCTTCGTGATTTTTTACCACTCACTGTTGATTATCAAGAGAAGCAATTTGCACAAGGTCTCATTCCAGCTAC ATATATGCGGAGGGAAGGTGCTCCGAAGGAACGTGAACTGTTATGCGGTCGAATCATTGATCGTCCGATTCGTCCGTTGTTTCCGCCTGGATTTTATCAT GAAGTTCAGGTATTGGCAAGTGTTCTTTCTTCGGATGGGAAACAAGATCCAGATGTACTCGCGGCTAATGCAACATCAGCTGCCCTTATGTTATCAGACA TTCCCTGGGGTGGCCCCATAGGAATGATTCGAATTGGGAGGATACACGGACAATTTATTGTAAATCCTACCATGGATGAGCTAAGTTTAAGTGATCTTAA CTTGATATATGCTTGTACACGGGACAAGACTTTGATGATTGATGTACAAGCTCGTGAGATAACTGAGAAAGACCTTGAGTCTGCTTTAAGACTGGCTCAT CCAGAGGCAATCAAGTTTATTGAACCTCAAATAAGGCTTGCTGCTAAAGCTGGTAAGTCTAAGAAAGAATACAAATTGTCTATGTTGTCTGACAAAACAG TGGAGAAAGTTGCTAAACTGGCAGAAGCATCCATTGAAGAAGTTTTTACTGATCCTGCTTATGGAAAGTTTGAGCGTGGAGAAGCATTAGAAAATATTAC ACAAGATGTAAGGAAAGTTTTTGAAGAAGAAGGTGATGAAGAAAGCTTAAAAGTTTTGCCAAAGGCTGTGGACACAGTGAGGAAGAAGGTGGTCCGTAAA AGGATTATTGCAGAAGGATTCAGACTTGATGGAAGACATCTGGATGAAGTTAGGCCTTTGTATTGTGAAGCTGGAATTTTACCCATGTTGCATGGTTCTG CACTTTTTAACCGTGGAGATACACAGGTCCTTTGCACAGTAACACTTGGAGCACCAACAGATGCTCAACACTTGGATTCTTTAGTTGGCCCTCCAACAAA GCGATTCATGCTTCACTATAGTTTTCCACCTTTCTGCATCAATGAAGTTGGAAAACGTGGTGGTCTGAACAGACGTGAAGTTGGACATGGAACTCTTGCT GAGAAGGCACTTCTTGCTGTGTTGCCTCCTGAAGATGATTTCCCATATACTGTTCGTGTCAACTCAGAAGTCATGGCTTCAGATGGTTCAACATCAATGG CAACAGTATGTGGAGGTAGTATGGCTTTGATGGATGCTGGCATTCCAGTTCGTGAACATGTTGCCGGTGTTTCTGTGGGTCTTGTTACTGAACTTGATCC GGCCACTGGCAAAATAACAGACTATCGTATATTGATTGATATTTTGGGCTTGGAAGACCATTTGGGTGACATAGACTTCAAGATTGCTGGAACTCGAAAA GGAGTTACTGCTATTCAGTTGGATATGAAGCCCGCTGGAATTCCTATAGATATTGTATGTGAATGCCTAGAACCTGCTCGTAAAGCTCGTCTTCATATTC TGGATCACATGGAACAAGAAGTTACCATACCTCGCATCAAGAATGACAGTACTTCTCCACGACTAGTCACCTTAAAGTACAGCAATGATGCTCTTCGTCG CTTGGTTGGGCCAATGGGTGTTCTAAAGAGAAAATTGGAAGAGGAAACAGGTGCCCGGCTGTCTGTAGGTGATGGAACTCTTACAATAGTTGCAAAGAAC GCATCTGTAATGGACAGAATATTAGAGAAGATTGATTTTATAGTTGGCCGAGAAATCGAAGTTGGAGGGACATACAAAGGTGTTGTCACCTCTGTAAAAG AATATGGAGTTTTTGTGGAGCTTAATGGTGGCCAGCAGGGCCTTCTCCACATCTCTGAGTTGTCACATGAACCGGTTTCCCAAATTTCGGATCTTGTCTC TGTTGGCCAGCAGCTTGATGTAATGTGCATAGGCCAAGATATTCGTGGTAACATTAAATTATCTCATAAAGCAACTTTGCGTTCTCCTGGCAGTTTCAAG ACTAATGATGTACCTAAAGGATCTGTTGCATCTGCAAAAGAAAAGGCCAAAATTTGGGCACCTGTATGGAATGTGCCTAGCACTGAAGAAAAATCAAGTT CTGCTTCTGAGCTGCCTATAGGAGGTCAAGATGAAGCAAGTGAAGCGAAATCAAAATCTGCTGCCTCCCAAATTCCGGTTATTTTAATACGAAGTGTTGC AGAGTGTGATGAGGAGGAGAAGTCTAACAGCGTAGATCTGTCTTCAAAGGGTACTACAGTTAATAATGGGGTAAAGTCGAACAGCAAGTCAAAATCTCGT CGATCTAAAAATACAGCTGATTCTCCATCTTCTGATTCAGGTCCTTTACCATATAAAAATGTTAAGATTTCCAAACCTTCAATACAAAAAGCTGTTGATA AGGCAACAGTAACTGCCAAAGATCTGACACTTGGAACCAAAGTTACTGCCAAAGTTTATCAAGTTTGTGCACATGGGTTGGTATTGGAATTGGGTGGAGG ACTTCGAGGCATGTACCGGTTCAAGGAAAACAACAAGAGTGATTTTAACATAGGTGACGAATTGCGAGTTGTGTGCTCAAGCTTTAATAGCAAGGGAGTT CCAGTTTTGTCTTTGGTCGATGAAGAATAACTTCGTCGTGTTCATTCCTTTCATGAGAGAGACCGTAGATTTACACTGCCATGAGTTCGAGAAATACTTG CAGCTGTGTAAGCACAGGACCAATGATTTCATTGAAAATGTGGTTATTGGCAGAGCCTAATGAGACATCAATCGGTTTATAACTTACTTCATTTAGTGGG AAAATGGTTAAATCACCATTGAGCTGCAGAATGAGTCCCATGCAATTCTTGAACTTTTGTGGTCCTTCCCTTAAGATATGAAAGGTTGAGAATGCTGGAA AATGGCTCTAAGTGATGCTTGATCACCATTTCTTAACAAGTCATGACCGGTGTAAGTCTATGTTGTCCGTTATTGTTCAGTTTTTTTGGTTGAGGAAAGG AGGAATTAAATGTATACATCATTAGCTCATCTTAGGTTTTGTCACCTACAACATTTCATTATCACAGATTGTTTTCTTATTTTATTTTTTTCACTATCCA AGCTTCAGTACAATTGGTAAGGAATTGACTCATAATCCACAAGGCTATGAATTCAAATCTTGATGTTGCTGTGAGGATCTCATTGATGAGTAATCTGTAA GCACCTTTACAAGTGTTCATGGAGTCGCTTTGGGTTTCGGGTATCATCGAAAATGTAACAACCCTGATCTGAAGCATACCCTGATTTCTTTGCCTTTTAG TGTTTCACATCTGTTATAGGATAATTCTATAATTTGACTTTTAGTGTGTAAGTACTTTTGGGGTTTAGTATCACCTATACTATACCAAATATGAACCCTG AACTTAGTCAAAGCAAGTTTTACTTGTTAATGGTGTTTTGTTCTTGTTGAACAATAAGTTAGAATAATATTATGTTACTCTTTACTCCACCTCATTTTCA AGGCATCTACAACACTTC
• Tissue: flowers
• Gene name: LI_gene_10399;
• Additional information: details;

Expression of Ll_transcript_46050

FPKM

• FPAB: 1.1
• FPNAB: 3.7
• LF1: 2.3
• LF2: 1.8
• LF3: 2.3
• LF4: 3.3
• UF1: 2.1
• UF2: 1.6
• UF3: 2.5
• UF4: 2.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_46050

• Blastp: Polyribonucleotide nucleotidyltransferase 2, mitochondrial from Arabidopsis with 65.79% of identity
• Blastx: Polyribonucleotide nucleotidyltransferase 2, mitochondrial from Arabidopsis with 65.52% of identity
• Eggnog: Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3'- to 5'-direction (By similarity)(COG1185)
• Kegg: Link to kegg annotations (AT5G14580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442533.1)
• Pfam: 3' exoribonuclease family, domain 1 (PF01138.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;