Ll_transcript_176670

• Id Trinity: FTRINITY_DN42694_c0_g1_i1
• Name Transcript: Ll_transcript_176670
• Sequence: CAAACTATATTTAACTGTACATGCCTGATAAATTCATTCATTCATTATTCATGTTAACTTGTTAAGTACGTCATTTCTTTGACTAAGTCTAATGCTTCTA TTCTTTTATCTGATCAAAAAAATTTCAATACCTTATCCCACACTCATTTTCTATCATCTCAAACCCAGAATTTATATCAGCATGAACCAAAACTAATGAC CCAAAACAGTACTATTGCTTAATTCACACTGAAATCAAGCATCATGGGGGTTGAAAACAAGGAAGATGATCATCCACGTGGTAATTTTCGTGGTACAAGT GCTACTGTCACTCTTGCTACAACTTTGTCTTTAATTGCTGTCATATTAGTAATTGCTCTTGTCTATTTCTATGCAAGATATCATCTACGACTCGATCGAA GAAGGCGCCAACAAAACTTTCTTCGTCGTGTCAACAATCAAATTGCAAACCTTGATGTCAACTCTACAAGGTCACCAAATTCTGGCCTTGACCCTCTTGT CATAGCCTCCCTGCCTAGACTCTTGTACAAGGAAACAAACCATTTCAGCCAAGGTGATGTTGTAGAGTGTTCTGTTTGCTTAGGCACTATTGTGGAAGAT GAAACAATTAGAGTGTTGCCAAATTGTAAGCATGTGTTCCATATTGATTGTGTTGATAAGTGGTTTGCTTCAAATAGTACTTGTCCGGTTTGTCGTGCCG TGGTTGAACCTACAGTGCAGTCAGGGCTTGATCATCTGGCTACTACAGAGGTCCAACCCACGGCACCACCGGTTGAGGATGTGTCACATGTTGATGTTAG TCGCGAAACCGAAAAGGTGAGTTGTTCAGGCTTGAGAATAGCATCTTTTCCAAGGATGGTTATTGGCATGGAAAGATCATTGAGAAGGAGCTATGATGAC TCTGCAGCAGTTGAAGATATAGAAAATCAATGACTATTGTTTTTCAATTAGATAAATGTTTATTTGCACAACATGTATGGATAATAATCTCTGGCAACAT TTTTGTTTAAGGAAAAAATATACAGAGGGAGTTTTTGTCAGGAAATATATGTTTTTCTTATTGGTACTTGTAAGATTGTATGTTAATTACATATAAATAC ATTTGATAGTTATACAATGTAAATATTAGATTGCTAAATGATATAGTTGTCGGGGCGTTTCAATTGACTATAGATGGTGTGATTTAAATTGGTACGGTGA ATAGGGTCTTTCGCGTCGCGATTTTCGGCGGTATGACTTGTTTAGAGTCGCCACTAAAAATGTAGTGGCGACTCTAAACAAGTCGTACAGCCGAAAATCG GGGCGCGACAGCTGGCTACTCC
• Tissue: flowers
• Gene name: LI_gene_10688;
• Additional information: details;

Expression of Ll_transcript_176670

FPKM

• FPAB: 31.7
• FPNAB: 2.2
• LF1: 0.6
• LF2: 0.6
• LF3: 1.7
• LF4: 4.1
• UF1: 0.2
• UF2: 0.5
• UF3: 3.9
• UF4: 7.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_176670

• Blastp: E3 ubiquitin-protein ligase ATL41 from Arabidopsis with 40.58% of identity
• Blastx: RING-H2 finger protein ATL40 from Arabidopsis with 39.49% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT2G42360)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416298.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;