| Id Trinity | FTRINITY_DN42850_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_217070 |
| Sequence | CCTAAATGTCATAAACGTCATAATGGCAAATGCTATAATGAATACCGTATTAAAAAAGTCCCTTAGCTTCTTGCCAGCTAAAACCTTCTTAAAGAATGGT GCAGCGTTGATACACACCAGCGCTGATAAAAAGGCGAAATGGTATCCGGATCCGGAGTGGATGGCCGGATTCGATGGGCCTGTTATGTACCCCGATGAGA ACACCAAAAACTGGTCGTTACAGCCTTGGAGTGCCAAGAAAGCACCTACCGAAAAGGAGGTTAAGAATGTTACGTTGAATTTTGGGCCTCAGCATCCGGC TGCTCACGGCGTGTTAAGACTGGTGATGGAGTTGGATGGAGAGATTGTAAAGAGATCGGACCCCCACATTGGTCTTTTGCATCGTGGTACAGAAAAATTG ATCGAATACAAAACCTACACGCAAGCTTTGCCGTATTTTGACCGTTTGGACTATGTGTCCATGATGTGCAATGAGCAGTGCTTCAGCTTGGCCATTGAAA AGTTGTTGAATATTGATATTCCTATTAGAGCCAAATATATTAGGACTTTGTTCGCGGAACTCACCAGAATTTTAAACCACATCATGGCCATTGGTACTCA TGCCTTAGATGTGGGTGCTTTAACCCCATTCTTCTGGCTCTTTGAGGAAAGAGAAAAAATGATGGAATTCTATGAAAGAGTATCCGGGGCTCGTATGCAC GCCGCATACATCAGACCTGGGGGTGTTTCTTTGGATATGCCGTTAGGTCTTATGGACGATATTTACGAGTTTGCCGCCAAATTTAACGAACGTATCGATG AAGTTGAGGATGTTTTGACCACGAATAGGATTTGGGTGCAGAGAACCGAAGATATCGGTATTGTTACTGCCGAGGATGCTTTAAATTATGGATTTAGTGG GGTTATGTTAAGAGGTTCAGGTATTAAATGGGACCTCCGCAAGGTTCAACCTTACGACGCCTACCATCTTGTCGATTTTGACGTGCCGATCGGCACTAAG GGGGACTGTTACGACAGGTACTTGATCAGGTTGGAGGAGATGAGACAGTCCCTCAGGATCATAGATCAGTGTTTAAACCAGATGCCAGCAGGCGAAATAA AAACCGACGACGCTAAATTAATGCCTCCAACCAGATCCGAAATGAAGACCTCCATGGAGGCGCTTATCCACCACTTCAAAATTTTCACCCAAGGGTACCA GGTGCCCCCCGGTGAAACGTATACAGCCATAGAAGCACCAAAAGGCGAGTTTGGCGTCTATTTGGTGTCAGATGGCAGTTCTAAACCCTACAGGTGCAAA ATCAAGGCACCTGGGTTCGCTCATCTAGCCGCCTTAGATAAAATCGGCAAAAACCACATGCTGGCAGATATCGTTGCCATCATAGGTACCCTTGATGTAG TCTTCGGCGAAATCGACAGATAGACACAAGTTATATATGTATTATGAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_10824; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_217070
| Blastp | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial from Rattus with 75.57% of identity |
|---|---|
| Blastx | NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial from Rattus with 75.57% of identity |
| Eggnog | NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity)(COG0649) |
| Kegg | Link to kegg annotations (289218) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (YP_009237626.1) |
| Pfam | Respiratory-chain NADH dehydrogenase, 49 Kd subunit (PF00346.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |