Id Trinity | FTRINITY_DN43234_c0_g1_i1 |
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Name Transcript | Ll_transcript_195098 |
Sequence | TTTCAGGTTGAGACTCGTCCTAGAATAATAGCTGCCCTTTGGCACTATATCAATTCTAGGAAGCTAGAAATCTCAAATGACCCATTCTCATTCATTTGTG ACCCTTCTCTCCAAATGCTTTTTGGGGCAAATAAGATGGAATTTGAAGAAGCTATTAAGAAGTTACCACAACATTTGTCACTCCCACAACCTATTAATTT GGAGCATGAAATCAAGCTTTCTGGAAATCCTACTTCTGATACTGACTGTTATGATATACAAGTTTATGTGCATCCTCCATTGGACAATGATATTTCTTCA ATCTTGGCAGGTCGTGAGAGTCAAAAGCAGATTGAGTTTTTTGATGATGTAATTAGCTCTTACATTAAGAAGGTTCATGAACATCAAAGAAGAAGGGCAT TCTTTCATAGCTTTAGTCA BLAST |
Tissue | flowers |
Gene name | LI_gene_11184; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_195098
Blastp | SWI/SNF complex component SNF12 homolog from Arabidopsis with 51.8% of identity |
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Blastx | SWI/SNF complex component SNF12 homolog from Arabidopsis with 51.8% of identity |
Eggnog | SWI SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member(COG5531) |
Kegg | Link to kegg annotations (AT5G14170) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019434318.1) |
Pfam | SWIB/MDM2 domain (PF02201.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |