| Id Trinity | FTRINITY_DN43314_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_271232 |
| Sequence | AAGGGAATGAGAGCAATAATAAGGAAGAAGCCTTATCCTATTGAGCTCTGTACCTATGTTCTTTGGAAAGAAAGAAAGAAAGAAATAGTTAAATACATGG CTACCTTTCATTTGGCCCCATTCCCATCCTTCACTACCCTTCTCAGTCAAAAACCTTTCCATTCTTTCCACTTCAGAACTACTCATTCAATGAAAACTGT GTGTTCCTCTTCAGCGTACAAAGTTGTTGTTGAGCACGAGGGCAAGACCAGAGTGGAAGCTGATCAGAACATTCTATCAAAGCCATTGGATTCAGGTTTG TCTGTTTCTATCACTTGCCCTGCTCCTGATTATTATTATAAAAGGCGATAAGCAAATGAAGTTGGGGCACACATTGTGAGACTTCCCCTCATCACCTCTT TGTATTTGGGACTGTCTCTCATATTCTACTATTAGATTATGTCTCTTAAATCAATTTGGCACAATCAATTGCTCAATTCATGTTCTCTTCAGTTTTATTA GTGATACCATCAACATTTTCTTTATGCTATGTTCTATGTTGTATATACTATGTACAGGATCGGATAATTCCTTTCCTCTTATTTTATACACGCTCCTAAC ATCTTAGATACATACATCTATGTGTCATGACACATTTGATGTCTCTACAACTTTTCAGATTTTGAAATGTTTCATTTTCATTTAACTCTTTCTTCACTAA TGCATGTGCATTACTGTCTCCCCATGCTTCAATAAATAAAAACAACAACAGTACCATCAATGGACAGAAATGTTGTGAATAAGTGCATTCTCATGATATC ATATATGAACTTCACTGCTAACATCTGTTGAAGAGACTATTGTTGCTGCTTTGTGGCCATTTATTTATTTATAAACAAGGAGTAGGATGCCAATTCTCCT TGCATCAAATATGTGTTTCATTACATGTTCTATAACACTTGAAGGGATCCAAAGATCAAATATAAAGGGTAAGTTATAAAACTATACACACTCTTTCCCT CTCTTTTTCCTTGTTAGAGAAATAATTGAGCATACTATGTATATAGTTCATCTGTTCAGTGGTCATAATAACATGATATAAAGAGGCATGGTAGGTCCTT TATTCGTTACCTCCTCCTCCTCCTCTGGTCTAATATTACACTGCCTCCTCCTCTGGTAGCTTCTTCATCAAGTCGCAGGCATGTTTTAGTCAGAGTTGGC ACTTCATTGGTTACCATGACTTTATCACCACTAATGGCATGGGCTCAAGAAATGTCAGCTGACAAAGAGGAAGGTGATGGTAAAGGGATTATTAGCGCCA TCGAATCATTGTTTGATCCTAATGAGAAAACCAAGTCTGGAAAGGTGTTGCCAAAGGCTTATTTAAAGTCAGCAAAAGAGGTAGTGAAAACACTGCGTGA ATCATTAAATGAAGCCTCAGATGATAATGCGAAATTTAGACGGACTGCAGACATGGCAAAGGAGTCGATTCGCGAGTATTTGGGCACTTGGAGAGGACAA CAGAGTGTAGTCCAAGAAGAATCTTATGTTGTGCTGGAGAAAGCAATCAGATCTTTGGCAAAATTTTACTCAAGGGCAGGGCCATCAACCCCACTATCTG AGGAAGTTAAATCAGAAATATTAGATTATCTAAACACTGTTGAACAATTTTTGTAGAACTTCTATAGAGCATCTTCCCATCGGTGTTGTACAAACATTTC AAACTCCAGGGATCGAGATGGTACTTTATTAGGCTATTCTTCAATAAAATCAACTTGTCTTACCATTTCAAACATTTCATCTTAATAGTTTCATATACTT GAAGAATCGCTGAGGTCCACTTTAGTTATTATCTATTGCGAAATCTGTAGTAACTTTCAACCATATGTCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_11264; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_271232
| Blastp | Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic from Arabidopsis with 64.38% of identity |
|---|---|
| Blastx | Photosystem II D1 precursor processing protein PSB27-H2, chloroplastic from Arabidopsis with 63.76% of identity |
| Eggnog | NA(ENOG4111U0T) |
| Kegg | Link to kegg annotations (AT1G05385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427868.1) |
| Pfam | Photosystem II Pbs27 (PF13326.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |