Id Trinity | FTRINITY_DN43431_c0_g1_i1 |
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Name Transcript | Ll_transcript_45915 |
Sequence | GGACGAGATGGTGCAAAAGGAGACAAAGGGGAAAAAGGTTACGTTGGAACAAGAGGTATACCTGGAGATTCACTCCACGGTATTCCTGGTCATAATGGTC CTGTTGGACCTGCTGGTGAAAAAGGAAATGCTGGAAGACCAGGTTATCCTGGAACACCAGGATCACCTGGACCAAAAGGTGATATTGGAGGAAGGTGCAT TGACTGTAGACCAGGTGAAAGAGGAGAAAAAGGTGACAGAGGGATAGATGGAAGAGATGGCACACCTGGCCTAAGAGGACCAGCAGGACAACCCGGATTT CCAGGTGCTCCTGGAAATGATGGAGTGCCTGGTAGAGATGGACCCCCTGGTAAACCGGGAGAACCTGGAAGGGAAGGATTACCTGGTCCACAGGGACCAG CAGGTCTAAATGCAATGGTACCAGATAATATGGTGAAACCGGAAAAGGGTTCCAAGGGTATGAGAGGTCCTGCAGGACCTGAAGGCCCTAAAGGTTTTAC TGGTAGACCTGGTAGTCCAGGTGTTGCTGGTTTCATGGGAGTACCAGGAGAAAAAGGCGACCAGGGTTTCTCCGGACATCCAGGATCTGATGGAAGGCCT GGTCAACCAGGCATACCTGGGGCTAAAGGTGAAAAAGGTGTAAGTCTAAAAGGTGAACATGGATATCCAGGCTTAAAAGGCGATAAAGGAAATCGAGGAC CTGACGGGTGGATAGGCCCCAAGGGAGAACCAGGTCAATGTCCACAAAATATAACAGCTCAGCTTAAAGGAGACAGAGGTCTAACGGGCCCACAAGGACC GGCTGGTATACCTGGTTTCGATGGAGAACGTGGTGAGAAGGGAGATCAAGGTGGTATAGGTTTTGCTGGACCACCGGGACAAGATGGTCCTCCTGGTCCA CCAGGAAGACGCGGTTTAGTTGGTATAAGGGGAGCTAAAGGAGAAAGAGGACCTTTGGGTTTTATTGGGGAGCCAGGTAGAGATGGACCCAGTGGAATGC CAGGAATTCCAGGATTTAAAGGAGATAAAGGAGAGGCTGGCATACCTGCCGTTGGACCTCCAGGTCCCCAAGGTTATCCAGGTATTAAAGGTGAAAAGGG BLAST |
Tissue | flowers |
Gene name | LI_gene_11398; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_45915
Blastp | Collagen alpha-1(IV) chain from Sophophora with 48.9% of identity |
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Blastx | Collagen alpha-1(IV) chain from Sophophora with 48.5% of identity |
Eggnog | collagen, type(ENOG410XNMM) |
Kegg | Link to kegg annotations (Dmel_CG4145) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_014507945.1) |
Pfam | Collagen triple helix repeat (20 copies) (PF01391.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |