Ll_transcript_45915

Id TrinityFTRINITY_DN43431_c0_g1_i1
Name TranscriptLl_transcript_45915
SequenceGGACGAGATGGTGCAAAAGGAGACAAAGGGGAAAAAGGTTACGTTGGAACAAGAGGTATACCTGGAGATTCACTCCACGGTATTCCTGGTCATAATGGTC CTGTTGGACCTGCTGGTGAAAAAGGAAATGCTGGAAGACCAGGTTATCCTGGAACACCAGGATCACCTGGACCAAAAGGTGATATTGGAGGAAGGTGCAT TGACTGTAGACCAGGTGAAAGAGGAGAAAAAGGTGACAGAGGGATAGATGGAAGAGATGGCACACCTGGCCTAAGAGGACCAGCAGGACAACCCGGATTT CCAGGTGCTCCTGGAAATGATGGAGTGCCTGGTAGAGATGGACCCCCTGGTAAACCGGGAGAACCTGGAAGGGAAGGATTACCTGGTCCACAGGGACCAG CAGGTCTAAATGCAATGGTACCAGATAATATGGTGAAACCGGAAAAGGGTTCCAAGGGTATGAGAGGTCCTGCAGGACCTGAAGGCCCTAAAGGTTTTAC TGGTAGACCTGGTAGTCCAGGTGTTGCTGGTTTCATGGGAGTACCAGGAGAAAAAGGCGACCAGGGTTTCTCCGGACATCCAGGATCTGATGGAAGGCCT GGTCAACCAGGCATACCTGGGGCTAAAGGTGAAAAAGGTGTAAGTCTAAAAGGTGAACATGGATATCCAGGCTTAAAAGGCGATAAAGGAAATCGAGGAC CTGACGGGTGGATAGGCCCCAAGGGAGAACCAGGTCAATGTCCACAAAATATAACAGCTCAGCTTAAAGGAGACAGAGGTCTAACGGGCCCACAAGGACC GGCTGGTATACCTGGTTTCGATGGAGAACGTGGTGAGAAGGGAGATCAAGGTGGTATAGGTTTTGCTGGACCACCGGGACAAGATGGTCCTCCTGGTCCA CCAGGAAGACGCGGTTTAGTTGGTATAAGGGGAGCTAAAGGAGAAAGAGGACCTTTGGGTTTTATTGGGGAGCCAGGTAGAGATGGACCCAGTGGAATGC CAGGAATTCCAGGATTTAAAGGAGATAAAGGAGAGGCTGGCATACCTGCCGTTGGACCTCCAGGTCCCCAAGGTTATCCAGGTATTAAAGGTGAAAAGGG BLAST
Tissueflowers
Gene nameLI_gene_11398; 
Additional informationdetails; 

Expression of Ll_transcript_45915

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_45915

BlastpCollagen alpha-1(IV) chain from Sophophora with 48.9% of identity
BlastxCollagen alpha-1(IV) chain from Sophophora with 48.5% of identity
Eggnogcollagen, type(ENOG410XNMM)
KeggLink to kegg annotations (Dmel_CG4145)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_014507945.1)
PfamCollagen triple helix repeat (20 copies) (PF01391.17)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;