| Id Trinity | FTRINITY_DN43643_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_235977 |
| Sequence | CTCATCACCATCTTGAAACTCATCATGCTCTCCCTGCCGTCCGATCAATCCACTCCTCCTCCTATTACCGTCCATCTCCAACACTGCGATGATTGATCTA ATAGCTCGACTCGGTGAGTTACGATTCGCGATCATCAACTCGCTTAACTCAGCGTGACTCAAACTCAGTCCTTTTCCAAAAATCTCCTCCACTTGGGAAA ATAATTTATGCTCTTTCAAACCAAGGTAGTTATTCGCCATTGTTTTAAACGTTGAGAAATTACAAAGCGGGAAATTAATATGGATATCGACCCGACCCGG TCGAAGAAAATTCGGGTCAATATTTTCCTTTGTTTTCATTGTGAAAACCGTTACTCTCTCTTCGCAGCTTTGAATTCCGTCCATGAAATTCAACAATCCT GAAGAACTCAACCATGTTTTCGTTCTTCTTTTCTCATTCTCGTGAAGAAACTGGTCGAGGTCTTCGATTACGATAATCGATTTCGGTTTTGTTTCAAGGA GAAGCGATTTCAGATCTGAATCGGTTTCAATTTGGAAGAGATCGATGTCGTAAACGTCGTATTTGAGGAAATTCGCCATGGCGGCTACGAAGCTTGATTT TCCGGTACCGGAGGGACCGTACAATAGGAAACTCCGTTTCCAAACACGGCCTAAGCGATGATAGTGTTGTTTCGCGTTCAGAAATGATTCGAGATCGGAT TTGACTCTGTTCTTGAGATCGGTTTCTATCGCCATTGTTTCAAACGTTGATGGATGAGTGAACGGAAAAGATCTCCAGCGTTGATTTCGATCTCCACCGT CGATGATAAACAACCGCAAATCGCGTTTTCGTTGTTCTTCAATCTCATCTGAAACCGTGAGAATGTAGTGAAGATAAGGACGGAGAATTCTTCTCTTATC AACTTTTCTAATCTTCAAAACAAATTTTCGAAGATTTGAATCGTTGAACCAGAAAACCGTGGCACCGAGAAAACTATCTTGGATAATCTGATTAGGGTTT AGCGTTAAAACGATGTCGTTTTCGTTCTTCCCGTTAACGAGGTTGGTGAAATCAGAGTCTTCGATAGAAGAGAGAGAGTGTAAATAGCGAGAGAGTTTCG TATAAAGAGGATTGTGATGAAACGTTTCGTTTTGGAGTTCTGGGATTGTGAGAAACTGGTACACGTGGCACCAATCCTGTGTGATTCTCCATAGCTTATT AACCGTGTAGATTAATCCGGTTTTGAAAAGCAATATGCGAAGAAGGAATAAGAGGAAGAGAATGAGGATTATGAGAAATATGAGGTTGTAGAAAAGCATG TTGCGGATAATGGCTTTTTTTGGAGATTAAAATTTCAACTGATTTTTTTTGAGTTGCAGAGTAGAGGGTGAAGAAGAGGTCTTCTTTTATTAACTTAACC CAACTTTGATTCAGTGTTTATATTCATATTTTATTTCGATCACTTTTGTATATTTTATATATTTTGTAATCAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_11614; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_235977
| Blastp | AAA-ATPase At2g46620 from Arabidopsis with 61.25% of identity |
|---|---|
| Blastx | AAA-ATPase At2g46620 from Arabidopsis with 62.41% of identity |
| Eggnog | Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (By similarity)(COG0465) |
| Kegg | Link to kegg annotations (AT2G46620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438920.1) |
| Pfam | Domain associated at C-terminal with AAA (PF14363.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |