| Id Trinity | FTRINITY_DN43935_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_165046 |
| Sequence | TCTCCATTCTCCATCAGTGCCACTGGCTTCGTTCAAATCAAGCACTCTCACAATTCACAACTCTTCAAATGGCTCTTCCATGTGACTCTGATGGCATTTG CATGTTCTGCAAAACCAAACCCACAATTCTCGAAACTCTCATTTGCAACACTTGCATCACTCCTTGGCACGTTCCTTGTCTTCCCGTTAATCATCGCCCT CTTAACATGCCCGATGCCGGTAAATGGGTATGCCCTGATTGTCTTATCATGTCCACTGAACCGGTTACTGGGTCCAACCATGGTGGTGGTGGTGGTTCGC TTATGGCTGCAGTTCGGGTGATTCAGTTGGATGCTACGTTGAGTGATGAGGAGAAAGATAAGAAGCGACAAGAGCTTTTGATTGGGTCGTTGAAAGTGAA TGATGGGAATTGTGCTGAAGGAGATGCGGTGAATAGTGTGCTTGATGTTTTTGATGGAAGTGAGTGCTCTATTTGCATGCAGTTGCCGGAAAGACCTGTC ACGACTCCATGTGGTCATAACTTCTGTCTTAGGTGTTTTGAAAAATGGATTTCACAAGGCAGCGGTAAATGTGCCAATTGTCGTTGCTTATTACCACCAA AGATGGCAAAAAACCCTCGAATTAACTCTCAACTTGCTATTGCCATCCGAATGGCAAAAATGGCAAGATCAGGGTGTGATGTTCCTGGGGGTCCGCCTAA GGTCTATCAGTTTATCCATAATCAAGACCGTCCAGACTCGGCTTTCACCACTGAGAGAGCTAAGAAGCCTGGACTAGCAAATGCTTGCAGTGGGAAGATC CTTGTTACTGTTCCCCAAGACCATTTCGGACCCATCCCTGCTGAGAATGACCCTACAAGGAATCGCGGTGTTCTGGTGGGAGATACCTGGATGAATAGGA TGGCTTGTAGACAGTGGGGTGCTCATTTTCCACATGTTTCTGGCATTTGTGGCCAGAGTACTTTTGGTGCTCAGTCTGTTGCCCTTTCTGGAGGTTACGT TGACGATGAAGACCACGGCGAGTGGTTCCTGTACACCGGCAGTGGTGGAAGAGATCTCAGTGGCAACAAGCGCACTAACAAGAACCAGTCATTCGATCAG AAATTTGAGAACATGAATGAGGCTCTCAGATTAAGTTGCCTAAAGGGCTATCCCGTGCGGGTAGTACGGTCCTCGAAGGAGAAACGTTCTGCTTATGCAC CAGATGAAGGAGTCAGATATGATGGAATCTATAGAATAGAGAAATGCTGGCGCAAAGTTGGGAAACAAGGTTGCAAGGTATGCAGATATTTGTTTGTGCG ATGTGACAATGAGCCAGCCCCGTGGACAAGTGATGATTGTGGAGACCGCCCACGCCCGCTGCCTAAAATTAAGGAATTGAAGGGTGCAGTTGATTTAGCT GAAAGGAAGGAAGCTCCATCATGGGATTATGATGAGGAGAAGGGCTGCTGGTTGTGGAAGAGGCCTCCACCTGAAAGCAGGAAATTAGCAGGCACTGTAA GCCCTGCGAACGGAAATACAGGAAAAGTTAAACGGAAATTGAAAACTGCATCCGTGAAAGAAAAGCTACTCAAAGAGTTTGCTTGCCAAATCTGTCGCAA GGTGTTGGCGAACCCTCTTACAACACCTTGTGCTCACAACTTTTGTAAAGCCTGTCTGGAGGGTGTTTTTTCCGGCCAAAGTTTTGTTAGAGAAAGGGCC TGCCGAAGCGGACGTTCATTACGTACACAAAAGAACATCATGAAATGCCCATCATGCCAAAATGACATAGCTGAGTTTCTGCAAAATCCACAGGTTAACA GACCAATGATGGGTATCATAGAAGCACTCCAGCGTGAGGCTGAAGAGATGGAGGAGAAGTGTTCAGAGTCAAGTGGCAAGAATGATGAAAATGAGAAGAA TGTGAGTGAAGTTTCAGAGCAGTGTGATTCAAGTGAGGAAGTGTTGGAGGAGATCAAGGACAACAATATGAACCGGGCAAAGAAGTTTAGGAAATGTGAT AAAGGTGCATCTGTGGAGAACGAAGAGGAATGAGGGGGGAGGCAAAAGGGACGTAGCATCATGCTTGTGATGGTTTGAGGAAAGTGGAAAAAAGAATATA TGCACCCATAATATACAAGTTTTTTATATTGTCCATTCATAATTTATTTTCAATTACTATTGACACATAAAAAAAGATAATATGTATGAATGATATGTAT AAATCTTTACATCAGTATATTACAATATAAAAAGGAAGATATTCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_11927; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_165046
| Blastp | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 60.78% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase ORTHRUS 2 from Arabidopsis with 61.64% of identity |
| Eggnog | ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase(COG3440) |
| Kegg | Link to kegg annotations (AT1G57820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019420497.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |