Id Trinity | FTRINITY_DN44300_c0_g1_i1 |
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Name Transcript | Ll_transcript_96891 |
Sequence | CATTTTCAATATAACCGTCCAATTTTGTTTATTTGTTGTTAAGTTGACCTACGAATATCCTGAAACTCAACAATCCCTCCACCGGCGCCGCCACCACGAC CACCATGTGCTCTTCATCTCCGGTGTTCATATCCACTGAGAGCTTATGCTCAATCCTCACCCATCAAACTCTGATCCATCACTTCCAATCCACTCTCCCC AAAGTCTCTACTTTGCTCCATTCCCCAATTCGCCAACACTATTCTCTCTCTCCTTCTTCCTCTCTCCTCCTCATGCCTTCTTGGTCCTCTTCCCCTTCTT TCCCTTACATTGGTGTCAAGCTTGTCACTCATTTCCCTCACAACTCTTCTCTCAATTTGCCTGGTGTTCAAGGAAGCTATGTCCTTTTTAGTTCCACCAC AGGACAAACTATTGCTACCATGGACTCCACTGAACTCACCCTTTATAGAACCTCCTCTGTTTCTGGCTTGGCTTCTACTTACTTGGCTAGAAATGATAGT CAAGTTCTTGTTATGGTTGGTGCTGGTGCCTTGGCTCCTCATTTGATAAGAGCTCATCTTTCAGCCAGACCCAGTTTGAGAAAAGTTATAATTTGGAACA GGACAGTGGCAAAGGCAAGAACTTTGGCACAGAAACTCAGAGAAAGTCATGGGTTTGAAGGGTTGGATTTTGAGGGTACTGGTGAGAATTTGGATGAGGT TGTTGGACTTGGGGACATTGTAAGTTGTGCCACTAATTCTGAGACACCTCTTGTTAAAGGTGAGAAGTTGAAGGCTGGTGCTCATTTGGATTTGGTGGGT TCCTTCACGCATTCGATGAAGGAATGTGATGATGAGGCCATAAGAAGGGGAAGGGTCTTTGTGGATAATGATGTTGCCCTAGAAGAAGCAGGGGAGCTGG TGGGTGCTTTTGAAAGAGGAGTGATCAAGAAAGTTGAAATTGTAGGGAATTTGGTTGAACTTGTTAGAGGAGACAAGGTTGGGAGAAGCAGTGTAGAGGA AATCACTGTGTTCAAGTCAGTTGGTTCTGCTGTAGTAGATATGCTTGCAGCACAATTGGTGTATGAGACTTACACAAGAAGCTGAACACTACTATCTCAC TGTAGTTTATGCTAAATTTTTCAATAAGATTATGGAGCTATGCACTCCCACAGCTTCTAATACAAACTAGAAATAAGACTTTCACAATATCTGTGACTGA TGGTAGTTTTTAAATTTTAATAAGTTCAAATGATCATGTCTATTTGATAATGTTAGTACTTGCTTTATCAAATGAAAGTACTGATATGATTATATATAAA TCTTAGTGTAATACAACTGAACAGTTTA BLAST |
Tissue | flowers |
Gene name | LI_gene_12317; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_96891
Blastp | Protein SAR DEFICIENT 4 from Arabidopsis with 68.24% of identity |
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Blastx | Protein SAR DEFICIENT 4 from Arabidopsis with 68.24% of identity |
Eggnog | Ornithine Cyclodeaminase(COG2423) |
Kegg | Link to kegg annotations (AT5G52810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428310.1) |
Pfam | Ornithine cyclodeaminase/mu-crystallin family (PF02423.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |