| Id Trinity | FTRINITY_DN44572_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_174993 |
| Sequence | AATAGAAGTTACCAAAACAAAAGAGAGTCTCTTAAACCTAATAACAGAAGGTACTAATAAAAGACCCTCTTGAAAAACTCCTCATATGTAATTCACCAAG CATTTACCTGTGTGGATATTATCACTCCTGTAATAATTCTCATCCCTCCTCTATTATTTTCTCCTTCTCATGGTGGATCTTACCCGCGCTTCTGGCACAA ACCCAATTCATTCAATTTGCATAACATGCAAAACAATTATCAGAAGATGGTTTAGACGTAAGAAATCATTATCCTCAAAGGAAGATCATAAGAAAAAACG TCACAGCCAAACTCAACAGGAACCTGTTGAAGATAAAAAAGCGGGTAAAACCATGAATGGAATTGATAGCTGCAGATTCAATGACGATCCATTAAGAGGA AATAATCCAACAAGTTCAAGAAGAGAAGGAGTATATAGGCCTAGAAAAACAGATAGTTCATGTTTCCCTTGCATGATGGATCATATGTCTAGAAATGAAT ACAGAAAGAATCACACCCCACCAAACAAGACGAGGGTGAGCTATGATTCTATCCCTTCCCCTTCTTCTTCTTCATGGAATAACAGTGGCAATATGAAGCC TCCTACTCTGCAATCAAAAACATCAAGCCGTAGGAGCAATCCAATCATGTATTCCAATTCATCTGGAATGCTAAAACCCCCACCAATTGAGAAAAAGATT GAATGCACCCTTGAAGAGTTGTGCTATGGATGCCAGAAAAAGATTAAAATCACTAGGGATGTCCTTACAAATACCGGGGGAATAGCTCAAGAAGAGGAAC TGCTAACAATAAATATACAACCTGGATGGAAGAAAGGAACAAAGATTACATTTGAAGGTAAAGGAAATGAAAGACCAGGTGCATATAGAGAAGATATAAT ATTTTTCATCTCAGAGAAGAGACACCAATTGTTTAGAAGAGAAAGAGATGATTTGGAATTGGGTATTGAAATTCCATTGGTAAAGGCACTAACTGGTTGT ACAATATCAGTTCCGCTATTGGGTGGTGATAAGATGAATTTGACAATAGATGAGATCATATACCCTGGCTATGAGAAGATCATCACAGGCCAAGGTATGC CAATCCCTAAAGAATCAGGGTTGAGAGGGAACCTCAAAATTACATTTCTAGTTGAGTTTCCAACACAACTCGCACGTAATCAGCGATCCGAGGTTTTTAA TATTTTGCAGGGTTCATGTTGATCAGATGAAATTTTAGATCCCTCACATTTTTTTTTGATTTATTGAATAGACTAAGTTTCTCAATCTTTGGAACACCAT GAGTTCTGAAAGCCAAGCGATGGTTTTGTAGTTTAAGGAATTAAAAATTAGGGTGGAAACTCTTGTATTTGTAATCCTGGAAGAATCATGGCAAAGTATA CACTTAGAAAATCATGTCTTGGAAATCCATTCTACTTTACT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_12629; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_174993
| Blastp | DnaJ homolog subfamily B member 13 from Mus with 43.86% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 13 from Mus with 44.12% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (69387) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019416333.1) |
| Pfam | DnaJ C terminal domain (PF01556.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |