| Id Trinity | FTRINITY_DN44603_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_4411 |
| Sequence | AAAAAAATAGACTTAGGTGACCCTGCAAAATGACCTGAACCCTCAAAAAACCCTCTAACATTATATCATCATAGTTAACATCACTACCTCTCTTCTTTTG AGTCTAATGTATCAAAATTCACGCTTTCATTTTCTGAACCAAACCCATTAACTATGCCATTGATTCACACACTTACACCATCTTCCTATGTTACCCTCAA TTCTCTCACCAATTATTCATTCCTCTCCAATGTTACTCTTCCTACCTTTGGATTCAGTCTCAACAAAACGCTTCATACCCATAACCCAAGTTTTGTTTTT TCAACCACAAGGAATCGTTTTCGTGCTTCTGTAATTAGCGCTAAAGCTGGAACAGATTACTATTCCACTTTGAATGTTACCAGCAATGCTACCCTGCAAG AAATTAAGAGCTCTTATAGGAAACTGGCTCGAAAGTACCATCCAGATATGAACAAAAGCCCAGGGGCAGAGGAGAAGTTCAAGGAGATAAGTGCTGCATA TGAGGTCCTATCAGACGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGTCAGGTCTACAAGGAGAAAATGGAGAATCAGCTAGTGCTTCTGGGGTT GATCCTTTTGATTTATTTGATGAATTATTTGGTCGTTCGGGAGGTATGTTTGGAAGTAGCAGTGAAGGCGGCATCAACTTCAGTTTGAGAAACAATAGAA ACAGTGGTCTTGATATCCGGTATGACCTCCATTTGAGTTTTGAAGAATCAATTTTCGGCGGACAGAAGGAGATTGAAATTTCTTGTTCTCAGACATGTAC TGATTGTGATGGTACAGGAGCTAAATCAAGGAATTGTATTAAACATTGCACAAATTGTGGTGGTAGAGGAGGAGAAATGAAAAGCCAGAGAACACCCTTT GGTATAATGTCTCAGGTTTCTACCTGCTCTAAGTGTAGCGGTCTTGGCAAGATAATCACTGACCACTGTCGAAGGTGTGACGGTAGCGGTCAGGTACAAT CTAAACAAACAGTCAATGTGGTCATTCCTCCTGGTGTCACTGATGGAGACACAACACAGATTCAAGGTGAAGGGAATTTTGATAAGAGAAGGAATATTAA TGGGGATCTTTTTATAGTCATCCATGTTGCTGAAAAGCGTGGAATTCGGAGAGAAGGTCTTCATTTGTACTCAAACATTAATATTGACTTCACAGAGGCA ATACTGGGTTCTGTTAAAAAGGTAGAAACTGTTGAAGGTATAAGGGATCTAAGAATTCCTTCTGGAATTCAACCTGGAGAGTCAGTGAAGTTGTCACGTT TGGGAGCACCAGACATGAATAAACCATCTATTCGAGGCGACCATTACTTCATTGTGAATGTTCTTATTCCTAAAGATATAAGTGGCGCAGAACGTGTACT GGTTCAGCAGTTAGCTTCACTAAGAGCATCTAGCAAAAATGATTCATCTTCTTCTGATGGCAATGGCATTGGGATACCTAAGGGAAAATTCAGGGCTCCA AAAGGTCAAGCTTCAAGCAAGGGAATCAAAGATGTTGATTCTCTGTGGAGATCAGTCAAGAACTTTGTAAGGGGAGGACAGTCTGAAGAAAGGTTCGCTT CGATTAGCCTCGATAGATCAGCGTCATTATCGAGATTTAATCACCACAATCATTCAGTCTCATATTCTTTCTTTGTTGTCTTAATTACAACTTGGATTTT TGCATCTATAGCTAAGTCTAGGTACTTGTTATTTAAAAAAAGAACCAAGCCCTTAACTTAAAAAACAGTGAAAAACATTAAGGGTAAGAAAAAGTGGAAA ATTGTTAGTGGAGTGGGGTGGAAAGGTTTTGAGTTTCATTCCTAGGTTCTTGGCAGAGGATGTATTGTTGGAATGTGAGTGAGAAAAGTGAACTTCACAC TCAAACACCTCTTCACACTTATACTATATCAAAATTATATTCTTTGTTATTGATCTAATTTGAATGCATTCAAATTGTAATTTTTTCCAGTATTAACAAA TTATGCATTATCTCTGAGAGTTAACTCAGTTGGTTAAGTTGTGAGACATAAGGTGAGGGCATCTCAGTTTAAATGTTGGTTGGTAATATAAATTATTTTT CATAGTCTTGAAGTGAACACTTGTTATACTGTCACATTTATTTATAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_12665; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_4411
| Blastp | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 45.5% of identity |
|---|---|
| Blastx | Chaperone protein dnaJ A6, chloroplastic from Arabidopsis with 46.05% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (AT2G22360) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436732.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |