Ll_transcript_4469

• Id Trinity: FTRINITY_DN44662_c0_g1_i1
• Name Transcript: Ll_transcript_4469
• Sequence: AATTGATAATATACAAAATTGTGTGTGAGTTTGACCTAGTTACTCTTTCAATTGCAGCTACAATTTCACGCCGCCGCCGCCACCACCGCCACCGCCGCCG CCATGGATTCATCATCAACCAACCCTAACCAACAACCTGAACTAGACCCTGAGAAGAAGAGGAAGAAGGAAGAGAAGGCAAGAGAGAAGCAATTGAAGAA AGAGAAGTTTCTTCTTAAGCAACAGCAACAATTACAGCAGTCATCATCCAACGCCTCTAAAAAAAGTGAAAAGAAAACTGTGAGGCGTGGTGCTGAGGAT GAGAATCCCGAAGATTATGTTGATCCTGAGACCCCATTGGGTGATAAGAAACGTGTTTCGCGTCAAATGGCAAAACAGTATAGTCCAGCTGCCGTGGAGA AATCGTGGTATGAATGGTGGGAGAAATCAAGGTATTTCGAGGCAGACTCTAGCAGCTCCAAACCACCTTTTACTATTGTTTTGCCTCCACCAAATGTGAC TGGTGCTCTCCACATAGGTCATGCTCTAACGGCTGCAATAGAGGACACAATGATTCGTTGGCGAAGAATGCAAGGCTACAATGCTTTGTGGGTCCCTGGG ATGGACCATGCTGGGATTGCCACACAGGTAGTTGTGGAGAAAAAGATAATGCGTGAAAAACAGCTAACGAGACATGATCTAGGCCGTGAGAAATTTATCT CTGAGGTTTGGGAGTGGAAAAACAAGTATGGAGGAACAATATTACAACAATTGCGCCGATTGGGAGCCTCTCTGGATTGGTCTCGTGAGTGCTTCACAAT GGATGAGAAAAGATCAGAAGCTGTGACAGAGGCATTTGTGAAACTTTACAAGGAAGACCTTATCTATAGGGCTGATCGTTTAGTGAATTGGGATTGTGTG TTACGAACAGCAATATCTGATATTGAGGTGGATTATATCGATATAAAAGAAAGGACTCTTGTAAAGGTGCCTGGATACGACAAACCAGTGGAATTTGGAG TTTTAACAAAATTTGCATACCCTGTGGAAGAGATTGGTGGTGAACTTGTTGTTGCCACAACTAGGATAGAAACTATGCTTGGCGACACTGCCATCGCAGT ACATCCTGATGATGAGAGATACAAACGCTTTCATGGAAAATTTGCTACTCATCCATTCAATGGCAGAAAGCTTCCTATAATTTGTGATAAGATTCTTGTT GACCCAAATTTCGGGACAGGTGCTGTTAAGATTACACCTGCCCATGATCCAAATGATTTCGAGGTGGGAAAACGTCACAACCTTGAATCTATTATTGTTT TCACCGATGATGGGAAAATAAATTCCAATGGTGGCGTAGAATTTACGGGCGTGCCACGATTTGAAGCTCGAGAAGCAATAAAAGAAGCATTACAGAAGAA GGGTCTTTACAGAGGTTCTGAAAACAATGAGATGCGCCTTGGTGTGTGTTCAAGAAGCAATGATGTTGTGGAGCCGATGATTAAGCCTCAGTGGTATGTC AATTGCAGTGATATTGCACGGCAAGCTCTTTCTGCTGCCACGGACGACGAAAACAAGAGACTAGAGATTATTCCAAAACAATATTTGGCTGAATGGAAGA GATGGCTTGTAAACATACGTGATTGGTGCATTTCAAGGCAGCTGTGGTGGGGTCACCAAATACCTGCATGGTATGTTACTTTGGAGGATGACATAGTGCA GGACTTCGGGTTTTACAATGATCATTGGGTAGTCGCAATAAATGAAGAGGAGGCCCAAGATAAGGCTAGCCAAAAGTATAATGGGAAGAAGTTTCATCTG ACCCGAGATCCCGATGTTCTTGATACATGGTTTTCTTCTGGTCTGTTCCCATTAACTGTGCTGGGTTGGCCTGATAATGCATCAGAAGACTTTAAGAAAT TCTACCCAACTTCTGTTTTGGAAACTGGCCATGATATCCTCTTTTTCTGGGTTGCTCGTATGGTGATGTTAGGGATGAAGTTGGGTAACGACTTGCCTTT TAGCAAGATTTATTTGCATCCCATGATTCGTGATGCACATGGGCGCAAGATGTCCAAGTCCTTAGGAAATGTTATTGACCCCATTGAAGTGATAAATGGG ATATCACTGGAAGGTCTACATCAGCGGTTAGAGTCTGGTAACCTGGACCCCAAAGAACTTGCTGTTGCCAAAGAGGGTCAGAAGAAGGACTTTCCAAATG GTATTGAAGAATGTGGTACTGATGCTCTCCGTTTTGCCCTGGTCTCGTACACAGCTCAGTCTGACAAAATTAACCTAGATATCCAAAGGGTGGTTGGGTA TCGACAATGGTGTAATAAATTATGGAATGCAGTACGATTTGCTATAAGTAAGCTTGGGGATGATTATATTCCACCTGCAAGTTTGAATCCAGATGTTCTT CCATTTAGCTGCCAGTGGATACTCTCTGTATTGAATAAAACCATATCCAAGATATTGAAGTCTCTAGAATCATTTGAGTTCTCAAGTGCTACCACCGCTG TGTATTCTTGGTGGCAATATCAGTTGTGTGATGTATTTATCGAAGTGATCAAGCCTTACTTTTCTTTTTCTGGTAACGATCCGAAGTTCGCTGCTGAAAG ACGCTTTGCACAAGATACTTTGTGGTTTTGTCTGGACAATGGTCTGCGGTTGCTTCATCCCTTTATGCCTTTTGTCACGGAAGAATTGTGGCAGCGTCTT CCTTCACCCAGGGAATCTAAGAGATCAGAATCTATCATGATAACTAGTTATCCAATAGCTGTGGAGAGTTGGAATAATGAAAGGGTTGAGAATGAGATGG ATCTTCTTGAGTCTACTGTTAAGTCTCTCAGGTCACTCGCAAAAGAAAGGCGTGACAGGCGACCGGCTTTTGCTCTCGCCCGAACACCGGCGGTTACTGA GATTATTAAGAGCCATCAATTGGAAATTGTAACACTGGCAAATCTATCCTCTTTGACAGTAATCAATGAACATGACACTGTTCCATCTGGATATGCTGAT TCCGTCGTAAACGAAAACCTTTCTGTTTATTTAGAGCTTCAAGGAATTAATTCTGCAGAAGTAGAACAAGCAAAGATCAAGAAGATAGATGAGCTAAAGA AGCAAATAGAAAGATTAGAGAAGATTATAAGTGCTCCTGGGTATGAAGAGAAGGTTTTGCCAAATATTCAAGCTAAGAACCAGGAGAAGCTTGATTCCCT AAAGGAGCTTTTACTGCTTGAGGAAGCAGCTGGTTTGAGTCTCTAGCTTCAAACTGAACTTTGTTTTTGGGTCCACAATTTAATAAACTTGATTTATCAT TAGTTTCCATCACATACTTATTATATCCTTAACACAACTACTATGAGTATGAGGGTCACTACATTTCAATTTGTTTTTTAGTTTATTTGCTGCTATAAAC AATGTCTTGCTAAAGTAATGCAAATTCTGGTACATTTGTGATTGTGATTTGAGCATTTGTTGGCTCACCATTATGTTCTTAGGATGATTTTTACATATTC CTAAATGTGGTTTTATCATGTGTAATGTTGGGTTTTTTAGAGGGTAATGAAAAGAAAAAGTTTGAG
• Tissue: flowers
• Gene name: LI_gene_12731;
• Additional information: details;

Expression of Ll_transcript_4469

FPKM

• FPAB: 36.3
• FPNAB: 54.6
• LF1: 36.6
• LF2: 36
• LF3: 37.5
• LF4: 41.5
• UF1: 30.9
• UF2: 35.7
• UF3: 39.5
• UF4: 35.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_4469

• Blastp: Valine--tRNA ligase, mitochondrial 1 from Arabidopsis with 72.02% of identity
• Blastx: Valine--tRNA ligase, mitochondrial 1 from Arabidopsis with 73.25% of identity
• Eggnog: amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner (By similarity)(COG0525)
• Kegg: Link to kegg annotations (AT1G14610)
• CantataDB: Link to cantataDB annotations (CNT0001756)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449213.1)
• Pfam: tRNA synthetases class I (I, L, M and V) (PF00133.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;