Ll_transcript_96074

• Id Trinity: FTRINITY_DN45821_c0_g1_i2
• Name Transcript: Ll_transcript_96074
• Sequence: AAGCAGAACACAGTGACTTTTCTTCACTGACCAAATGGGTTTCACAAAGCGCACTTCTCTTCTTCAAAATTCACTTTCTCTTCCTCATTCCCTTTCATTC TCTTCTCAACCTCTTCAAATTCCACACCAACATCTTCAAAATCTTCAAAAGCTTCATTCTTTACTCGACCATGGTCACATCATTCCCGCTAGAAGGTTCC TCAATTCCTTTCTCTTTTCCAAAACCCCTTTTTTCTGTTCCCCCACTCAACTTCATACCCTTATCTCAAAACCCATTTTCTCAGATACCCTTTTATACGT TGTTTCTTCTGTTCCCACTACGATCAATGATGCTACACATTTATACTATTCCATGGTCAAAGACGGTTTTACCCCTTCAATTGCTTCTGTTAATCGATTG CTCAAAACCCTAGCTTCTGGGAAGCGGTTTCATCAAACCCTTGTTGTGTTTTCGAAGATTGCGGGTTCTGGTGTTAGACTTGATGTTGGGTCGTATGAAA AAGCTGTTCTTGCTGCTGTTATGTTGAAGGATGTGGATAAGGGTTTTGGGTTTATGAGATCGATGGAGAAAGAAGGTTTGAGTCCTTCTGTGTTTGTGTA TAATTTGGTGATGGGTGGGTTTTGTAAAATTAGGAAGATTAAGAATGCTCGTAAAGTGTTCGATGAAATGTTTGAGAGAAAGGTGGTCCCGAATACGATT AGTTTTAATACGATGATTGATGGGTATTGTAAGGTGGGTGATATAGATGAAGGTTTTAGGTTGAAGGAGAGAATGAAGAGTGAGGGTGTTGAGGCTAATG TTGTTACTTATAATTCTTTGTTAACTGGTCTTTGTGATTCTGGAAGGATGGAAGATGTAAGGAATGTGTTGCTAGAGATGGAGGTTAACGGATTTTTGCC TGATGGGTTTTCGTGTGTTATATTTGATGATCGTCAATCAGGTGATGCTGCTGCATTGGATGAGAACGTGTTTGGTAAAGGAGAAAGAATTGACATGCAT ACTTATTGTATTTTGTTGAATGGATTGTGCAAGGTAGGAAGGGTTGAAAAGGCCAAGAAGGTTTTGGCCAAGCTAGTAGATAATGGAGTTGTTATTCCCA GCAATGTACCTTATACTACATTAGTAAATGCATATTGCCAAGAGGGTGACATGAAGAAAGCTATACTTACAATTGAAGAAATGGAAGAACGAGGGTTGAA GCCTAGTAGTGTCACTTTCAATACCCTGATTAACAAGTTATGTGAAACAGATGAGATGGACGAGGCTGAGAGGTGGATTACGAGGATGATAGAGAAGGGT GTTTCCCCCACGGTGGCGACTTATAACCCTTTGATTAATAGTTATGGCAAGATGCACCATTTTAGCAGGTGTTTCGATATTCTCGAGGAAATGGAAAAGA TTGGGTTAAAGCCTAATGTCATAAGTTATGGTTCTTTAATAAATTTTCTATGCAAAGATCATAAAATTGTTGATGCTGAGAATGTTCTTGCAGATATGGC AGGACGTGGGGTTTCTCCAAATGCTGAAATATATAATATGCTAATCGAAGCTAGTTTCTCAATGAATAAATTGGAAGATGCCTACAGATTTTTCGATGAA ATGATAAAAAATGGAATAGATCCAACTATCGTGACATTCAATACACTGATAAATGGACTTGGAAGAAATGGAAGGCTAAAGGAAGCTGAGGATTTGCTTC TCCAAATGACTAGCAAGGTGGACCAGGCAGAGACGTGGGTTAAGAGGATGATAGAGGATGGTGTTTCCCCCACAGTGGAAACTTATAACTCTTTGATTAA AGGTTATGGTCAGATGAAGCATTTTGTGAGGTGTTTCGAGATTCTCGAGGAAATGGAAAAGATTGGAATAAAGCCTAATGTCATAAGCTATGGTTCTTTA ATACATTGTCTATGCAAAGATCATAAACTTCTTGATGCTGAGATTGTCCTTGCAGATATGGCAGGTCATGGGGTTTCTCCTAATGCAGAAGTATATAATA TGGTCATCGAAGCGAGCTGCTCGATGGGTAAATTGAAAGATGCCTTCAGGTTTTTTGATGAAATGAAGAAAAATGAAATAGATCCAACTCTTGTGACATA CAATATACTGATAAATGGACTCGGAAGAAATGGAAGGCTAAAGAAAGCTGAGGATTTGTTTCTCCAAATGGCTAGTAAGGGGCTTAGTCCAGATGTAATC ACATACAATTCCCTGATATTAGGATATGCCCAGTCGGGAAACACCGAGAAAAGCCTTGAATTGTATGATGATATGAAAAGGGTAGGCATTAAACCTACAA TCGGAACTTTCCATTCTTTGTTGTACGCATGCAGGAAGGACAGTGTGGTGACAGCTGAGAAATTTTTTCAAGAAATGTTACAAATGGATTTGATTCCTGA TCGAGTTGCGTATAATGAAATGATTTACTGTTATGCCGAAGAAGGAAATGTTTCGAAGGCAATGTCTTTGCACCAGCAGATGGTTGATCAAGGAGTTGAT GCTGACAAAGTTACTTACAACTGCTTGATTCTAGCATACCTTCGAGATAGAAGGGCTTCAGAAGTAAAGCATCTTGTTGATGATATGAAGGCTAAAGGAC TGGTTCCTAAAGCTGATACATATAACATTCTGATTAAGGGACACTGCGACTTAAAAGACTTCAACGGTGCCTATTTTTGGTACCGGGAAATGTTCGACTG GGGTATGCTTTTAAATGCGAACTTGTGCTATCAGCTTATATCTGGACTTGGAGAGGAGGGAATGCTGCAAGAGGCTCAATTTGTATCCTCAGAATTGAGT AGTAGAGAGCTGAACAACTAGAATATTGACAACAAATCATCGCCCGAATCTTCAACTGATATGATAGTTGAAGAGGAAGGAAGGGAGAGGGGGAAACTTT AGACTCATCTCACAAGTGCATTTCATGGCTCTCGGGTCTTTCTTTATTCTTCATTTTTCTCCAAAACTTAACTCGTAAACTGACCCTTAAATGTCACTCT ATGCTATCAGCAGAGGAGTGAATGCTGTAAGAGACCCAAACTGTATCCTCAGAATAATTTGGGAGCATATACACTACACTGTGTTTCAAAATTATCATTA TGTTCAAAATGTATTATCCTCAAATGTTATGAAACTTATTATATAGAATCTGATACTGTTTTCATTTTGTAATCAGCTTTTATTAATTATAAGCACTAAA ACTATATTGAAGTGTTTATCAAAGCATTTCATTGATGATATGAAATATTTAAGAGCTGGATCCAAAAGCTTATACATATTTACATGTTTGTTAAGGTACA TTGCAACATCAAGATTTAAATGAAGTTTGTGCTGAAAAGAGGTTTCTACATAATGCTGAGAAGGTAAGGCTGCAAGATTGAAGATTCTCAAATTGTCTCC TCAAAATGGGTGGTGAAAAAAGAAAGTCCTAACCAATGGACATTTTTAATCATACTTTATAGCTCATTATTTATATGTGAGGAAAGAGCTTAATAAAGTT TGAAGGAAAGTTAAATATGAAAAACTTATCTCAAAATCTATTTTGAAGTGTGG
• Tissue: flowers
• Gene name: LI_gene_13950;
• Additional information: details;

Expression of Ll_transcript_96074

FPKM

• FPAB: 1.6
• FPNAB: 2
• LF1: 1.7
• LF2: 1.8
• LF3: 2
• LF4: 1.9
• UF1: 1.7
• UF2: 1.4
• UF3: 2
• UF4: 1.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_96074

• Blastp: Pentatricopeptide repeat-containing protein At5g12100, mitochondrial from Arabidopsis with 39.3% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g12100, mitochondrial from Arabidopsis with 39.42% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G12100)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456897.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;