| Id Trinity | FTRINITY_DN45966_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_118092 |
| Sequence | CCCTCTCGATCGAAATAACAATCGCGTAAAACCCCTCTTCTTCCTCCTCTTCTTCTTCACCTGCTTTCTCTCCACTGCTGCTATTCTCTTCTCTGGAATT GCGCTCAAAATTTAAATGTTCAAAACGCATCATGTCAAACTGTGCATAGTTGTAACAAAAACAAGGGTTTCTGTAAGGTAAATCACTCCACCAAACTAGA CCATGAGACAAGTTGTAGATTCCTTACCAGTCTTGCGCTCCCATGGTTACTATACCAAACCATCTTTGAAGGAGTTAGCTTCGCTTGAACTCGTTGACCC TGGTTATTGCACTCGTGTTCCTCATTTCACTGTTGGAAGGCTTGGCTATGGATCTGTCACATATCTTGCCAAAACCGATGTTCGAGGCTTAAATCTCGAT GAAATTGTCAAGTTTCATAAGCATGAGGTAGTTGTATATGATGATGAAAATGATAAGCCTGAAGTCGGTATGGGCCTTAACAAGCCAGCTGAAGTGGTTT TGGTGCTAGATAGTGGAATATTCAACTCTAAAGACGTGCCAGTCCAAAGATTGAAACAATGTACTGAGAGGCAAGGAGCAGAATTTGTTTCCTTTGACAT ATCAACTGGTGAGTGGAAATTCTTAGTTCAACACTTTAGTAGATTTGGATTTGGTGATGATGATGATGAAGGAGACATCACTATGGATGATGCTGAGATA CATGATGTTCTGAAGGAATCTCCTACAAATGCCAACGGGATTGAGCTTTCTCATTCTCTTCCTGCTCATCTTAGGCTTGATCCTGTTAAGACGAGAGAAA TGAGATTGTTGATGTTTCCTGATGAAGAAGAGGCAGAGGACTTCGGTCAAAAATCATCTTTCGGTAAGGAGTCTGTAAGGCCTTCCCACAATTCCTCTCA GGCAATGAACCTTAGATCCACTCCACCAGTTGCACGAAAAACGCCATTTCCATTACTTGAGTATAAGCACGGGAGTTTTGAATCGAATTCTCCTGGAGCC ATTTTAATGGTCCAGCAGCGTAAGGGCTCACCTCTTAAGACAGTTAAAACACAAGGTTTTAAGCTAGACCTCAAGCATGAAACTCCAGTATCCAGAAACT ATGCCCGTAATATAGTTGATGCTGGTCTGTTTATGGGCAAGTCGTTTAGAGTTGGGTGGGGACCTAATGGCATTCTTGTCCATTCTGGTGCACCTGTAGG AAGTGGTAGCGACCACAGGCTATTATCATCAGTTGTCAACTTGGAGAAAGTTGCTTTTGATAATCTGGTTAGAGATGAAAATAAAAAAGTGAGTGAGGAA CTTATTGACCATACCCTGGTTTCTCCGTTAAATTTTCATAAAGGATTAAACCATGTGATGAAAGGTGTTGAAATTGGTCCTTGCAAGCTGACACTTCAAA AGCTTGAAGCTAGTCGTACAGCCCTGTCAGAGATTTCTCATGGGTACTGTGATATTATTGAGAGGCAAATGACTGTTCCTGAGTTATCTTCCTCTACCCG ATTGGGTTTGACACATCAAGTCATGACTTGGGAATTAATTAGAGTTCTTTTTTCTGAAAGAGAACCAAAAGGTCAAGTAGAATCTTTGGGCGCTGACAAT GAAGAAGATATGATGCAGGATATGAAAGAAGCTTCTCAAGATGTTGAACCAGAAGCACTCCCTCTTATGAGGAGGGCAGAATTCAGTTATTGGTTGCGTG AGAGTGTTTCCTATCATGTTCAAAATCAAATAAGCTCTCTAAATGACTCTCATTATCTACAGCATATTTTTGTACTCCTGACTGGACGACAACTGGATGA AGCAGTACAACAAGCTGTGTCCAAAGGAGATGTGAGGTTGGCTTGTTTGTTGGGTCAGGCTGGTGGCTCTACTGTGAATCGCTCTGATATTGGAAGGCAA CTTGATATTTGGAGAAATAAAGGGCTGGATTTTAGTTTCATTGAAAAGGACAGGTTGAGACTGTATGAATTACTCGCAGGAAATATTCATGATGCATTGC TTGGTTATTCCAAACTTGACTGGAGGAGATTCTTAGGCTTGTTGATGTGGTACAAGTTACCACCTGACACTTCACTACCCATTGCTTTTCGGACGTATAA ACATTTTCTTGATGAGGGAAGGGCCCCATTTCCAGTTCCACTCTTTATTGATGAGGGAACATCAGAAGAGGCTATCAGTTATAGCGCTGATAAACACTTT GACATTTCATTTTACCTCATGCTTCTTCATGCTAGTGATGAGACAGAGTTCGGGTTTTTGAAAAATATGCTTAGTGCCTTCTCCTCAACCCCTGATCCAC TTGATTATCATATGATCTGGCATCAACGTGCAGTCTTGGAAGCAGTGGGTGTTATCCATTCTAATGATCTTCATGTTCTAGACATGGGGTATGTGTCTCA GCTGTTGTGCTTAGGGAAATGTCATTGGGCCATATACGTGGTCCTTCACTTGCCTATTCGCGAAGATTATCCATATCTTCATGTGAATCTGATTCGGGAA ATATTGTTCCAGTACTGTGAAATATGGAGTTCAGATGAATCTCAATACCAGTTCATCGATGATTTAGGCATTCCCCCAGAATGGATGCATGAGGCTTTGG CTATTTATTATAGTTATAATGGGGATCTCTCAAAAGCCCTTGAGCACTTTCTTCAGTGTGCAAATTGGCAGAAAGCTCATACCATTTTTATAACTTCAGT TGCTCATAAGTTATTCTTGCAAGCCAAACACACGGAGATCTGGAGGATTGTGACTGCCATGGAGGATCATAAATCTGAAATTGAGAATTGGGAGTTGGGA GCTGGAATTTATATTTCATTTTATTGGATGAGAAATTCACTTCAGGGGGACACTAATGCCATGAGTGAATTGGATTCTCTTCAAAGTAAAAATGCTGCTT GTGAGGAATTAGTGAGCCAGCTAAATGAATCATTGGCTTTTTGGGGTAGCAGATTACCTGTTGATGCAAGGGTGGTGTATTCAAAAATGGCGTCGGAGAT GTGCGATTTGCTGCTATCTGCTGTAGGTGAGGGTGCTACTCGTGATGAGCAGTTTAGCTGCTTTAACACTGCTTTCAGTGCTCCTATTCCAGAAAATCTT CGCTCTGGTCACTTGCAGGATGCACTACATCTCTTTACCAGCTTTCTCTCTGAGATTGCTACATAATTCCACAATCTGCTCTCAGGGTTTTAAACTAAAA TCAGTGAAGAACTTCGATTTGCATTGCTGCCGGGGATTTTGATCTGCTGTGCTCTTTGAATCTGTATCATTTTATAGTATAGTCTTTCATGGGAAGTTGG AGATGCTGCTAAATATGATCATAATTCATAAATGTTGACTACATGATCATAATTCATGTGAGTCTGTATTTTTTTTCCTCCTAATTTTTCATTTCTCCTA TCATTAATTATTTTACACCACTTGCATGAATCTAAAAACATTAACTGAAGGTGTGACCGTGGGTTGAGTTTTAGATGAGTTCGAAGTTAATGTATTTCAT GGCTCTAAAGACATCCTTTTATATTTGTCCCAAAAATATAACTTGTAAACATACCCA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_14112; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_118092
| Blastp | Nuclear pore complex protein NUP96 from Arabidopsis with 58.65% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP96 from Arabidopsis with 57.69% of identity |
| Eggnog | nucleoporin(ENOG410ZXB8) |
| Kegg | Link to kegg annotations (AT1G80680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435752.1) |
| Pfam | Nucleoporin autopeptidase (PF04096.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |