| Id Trinity | FTRINITY_DN46462_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_117752 |
| Sequence | CAAACCCTCTTTTTTCAGCTTTTCATATTCTTCTCCACTTCACTCATTTACTCTCTCAATATTTATTACACTTTTACCAATGGCAGCATATTCCGCTGCC GAAGATGTAAAGTTTCAGAAAAAAGACGACGTCGTTTACTTTAACGGCCAACCCGTCCACATGGCCATCCCGTTAACGGTGATCCGCTCCGTCACAAGTA ATGGCGGTGCTCGCGTTGTTGCGCCGCCGCTGGTTGAAGTTAAGGAAGAGCCAAAGGAAGTAACCGATTCCGAAGTGGTAATAGAGACTCAGATGAAAAA GCCAAAAATAGAACACGAGTGTTTTGAATTTAAAGACACTAGATCGCCGTCGTTTGATCGTTTTCTCGAGTTGAGTAACACGAAAGTTATGTCACACGAC GAGTCCTTAAAATCAATTGTTCATGTGAAAGAAGAACGAAGCGAGTGCATTGAACCGGAAGAGAAGAAACCGGTTTTTTTCGAAGTGCGTGAGAAAGAAA CGCCGTCGTTTTCAGAAGATTCTCTGAAATCAACTGCAGCACAAGGAGTTGATTCTGATGCTGTTGAATCTAAGAGCAAGAGGTGTGGTGATGAAGAAGT TCAGATTCTTAAGGTGAATCCTTTTGCAGGTTTGAATCTGAAGAGGCATTCGAAGGCGAAGGTGGCTGAGGTGAAGAAGGAGAAGGTAGAAGTGAAGATT CTTAATTTGGAGGATGGCGAGTTTCCGATCGAGCCAGGGTGGTTATTGATCGGAAGGAAAGTGGAACTCGCGCTCGCGACTGCGAAAGGAGTGAGGAAAT TGGTTGATAATGAGATTGTTCACTTCAATTTCACTCTTCCATACAAGTCCAAATCACAGTGGATTGTTCGCATTTCAACCAAGCGTTCTGGAGAGGTTGG AAGGCTTCCTATGGAATGGGCAAACACGGTTGTTCCACTTGTGCAGTCTGGAAAGGTTAAGGTTCAAGCGAGATGCATATCCGCCCCTTACAGCCTGCAA ATGATGCAAGAAATCATGTTGCTAGTAAGTTTTTACACTCACCAATCTATACTCACACAAAGTGTTGATACCTCTTGGAATCTAGATGCTACAAACATTA ACCCTACTATTTATCCACTGCTTACACTGTTCAAAATGCTAGAGATTAAGCCGTCTCAGAAGGCTGATTTCGCTCCTGAGGATATTGATTCTAGGAAGCG CTTGCTTAATCCAAAGCTTGATCCTGATGAGGTTGCAGCATTACCTTTAATTAAGAGAAGAAAGGGTGGTGACCAGCTATCAGAACAAAAAGATGATGAT GAACAAGCTCTTTCAGAGTCTGCTTTGAATAAGCTTGTTGGAGCTGCAGAAATCTATGAGCTGGAGGAGAAGGATGGCCCAAACACACTGACTTGTTGTC TGAAGCCTTACCAGAAACAAGCTCTCTATTGGATGTCAGAAATTGAGAAGGGGATGAATGTTGAGAGGGATGCAGAAAATCTTCATCCTTGCTGGTCAGC CTACAATATATGTGATGGAAGGACAATTTATGTGAACATCTTCACAGGGGAAGCTACAACAAGATTTCCAAGAGCAACTCAGATGGCAAGAGGAGGAATT CTGGCAGATGCAATGGGACTTGGAAAAACTGTTATGACAATTGCTCTGATTCTTAGTAACCCAAGCAAGGGGAATGATGCAGAGAATGCAACTGATAACC TTGCTACAAATAAGAGGAATATGAACCCCACATACAGAGTGAATGGTGGCACTCTTATTGTTTGTCCCATGGCGTTGCTAGGTCAGTGGAAGGATGAGCT TGAAACACATTCAAAGGCTGGTAGTATAACAATATTTGTTCACTATGGTGGGGGTAGAACCAATAATCCCCAGCTGCTCTCAGAGCATGATGTTGTCTTA ACTACATACGGAGTCCTACAATCTGCATTTAAAAGTGATGGAGTGAATAGCATTTACCACAGGGTCAATTGGTACAGGGTGGTGTTAGATGAAGCTCATC ATATCAAAGGCCATAAATTACAGATTTCCCAGGCTGCTTTTGCTTTGTTGTCACACTGCCGCTGGTGTCTAACTGGAACCCCTATTCAGAATAGTTTAGA AGACTTATTCAGCCTCTTGTGCTTCTTGCGTGTTGAGCCTTGGTGCAACTGGGCATGGTGGCATAAGTTGATTCAAAGGCCCCATGAGAATAATGATCCA AGGGCCCTGAAATTGGTCAAGGGCATTTTGAGGACTATAATGTTAAGAAGAACTAAGGAAACAAAGGACAAAGAAGGAAGGCCCATACTAGTCCTGCCAC CAACTAATATTCAATTAATCGAGTGTGAACAGTCAGAATCTGAACGTGAATTCTATGATGCCCTCTTTATGAGATCTAAAGTCCAGTTTGATAAGTATGT TGAACAAAGAAAGGTTTTTAACCATTATGCCAATATCCTGGACCTACTGATGCAACTGAGACGTTGTTGTAACCATCCATTTATGGCTTTGTGTGGAAAA GATTCACAGAAGTATGTTGACTTGAGCAGACTCGCACGAAGATTCCTTCAGGCTAACACTAATTCGTCCCACATGTGCATCCAAGATGATCCACAGCAAA GTGCAGATTTGAACAAACTGGCAACCAAGTTCCTCCTGAAGACTGATTCTGCTCCAAATGCAGTCCAATCTCGTGCATACATTGATGGGGTTATGGATAA TATTCAAAATGGTGAAAACATAGAATGCCCTATATGTTTTGAGTCACCAGATGATCCTGTGTTTACACCATGTGCACATAGCTTGTGTAAAGAATGCCTA TTCAATTTCTGGGGGACCTCAGCGGGTGGTAAATGTCCAATCTGTCGTCAAAAGCTCCAGAAAAGTGATCTGATTACTTGTCCATCTTTAAGCCCGTTTA AGGTTGATGTTGAGAACAACATGACAGAGTCTTCAAAGGTTTCAAAGCTATTGGATTACTTGCAATCCATTGAGAGATCACACTCCGGTGAAAAAAGTAT TGTCTTCAGTCAGTGGACTTCATTTTTTGATCTATTGGAGAATCCATTGAAAATTAGAGGTATTGCTTATTTAAGATTTGATGGGAAGTTGACTCAGAAA CAGAGGGAGAAAGTTCTGAATGAATTTAATGAGACAAAAGAGAAAAGGGTTTTGTTGATGTCACTAAAAGCTGGTGGCGTGGGTTTGAACTTAACAGCTG CCTCACATGTTTTCATTATGGACCCATGGTGGAATCCTGCAGTTGAGGAGCAAGCAATAATGAGAATTCATCGTATAGGACAAAAGCGTAGAGTTATTGT TCGAAGATTCATCCTCAAGGACACAGTGGAAGATCGTTTGCAACAAGTGCAAGCAAAGAAACAAAGAATGATATCTGGTGCCCTCACAGATGATGAGGTT AGGTCGTCAAGGATTCAAGACCTTAAAATGCTATTCACATGAGATAATCTTATAAAACTAGATGTTAGTTTTCTTCAATTTTAGATTTAGATCTATAACT AAACACATTTTGTATGGTAAGGTCACTTATTTCTGGAAGGGCTTCTTTCTCATTGTGGTGTTTGAAGTCTCAATTCTATGAAAGAAGCCCACTCTTTTGT AAATCTTGAACATGAGTAGTTTTAGTTAAAAAGGGTATTTATCTATGATCTAGTTAATTCAGCTCTAGATTTTGTATTTTTTACTGAGACAATTCAAAGT CTGGTAACAAGAGCAAAGATGACTGATTATTCATCAGAAGATGTTGGAATAGTAAATGCACAAGGAATGAAAGTTAATGCTATGTTCTTTTATTTAATGC TTGTATCTCATGTTCAATGAATGAGCAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_14641; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_117752
| Blastp | DNA repair protein RAD5B from Arabidopsis with 61.42% of identity |
|---|---|
| Blastx | DNA repair protein RAD5B from Arabidopsis with 62.12% of identity |
| Eggnog | Transcription termination factor, RNA polymerase II(ENOG410XPDU) |
| Kegg | Link to kegg annotations (AT5G43530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449940.1) |
| Pfam | HIRAN domain (PF08797.10) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |