Ll_transcript_117867

• Id Trinity: FTRINITY_DN46494_c0_g1_i1
• Name Transcript: Ll_transcript_117867
• Sequence: CTAGACTCGTACTTGTAAATTGAAACTACCAGTAGAAAATTTGTTTATATAAAAAATGTTCACTTTAAACTAAAATTAGACTATGCATTCTTCTAAACCT TTCTATAATGCCAAGCCAACATAGAGTATTACTAAGATCAAATTTGGAATTCCTTCACCAATTCAATTTTAAACAATTTTTTCATTTTTCCAACTTATCA TCCCATTCTCTTCAATCACATGATTCATATATAAATATTCTTCCACTCCCAAAACAACATGAAATTGGTCGTGAATTGGCCAAATTACTGCAATTACCAT GCCCAAAGAATCCCACCCCATATTACTATAAGAAAATCCATACCCACATTGTGGTTTTGGGTTTTCAACATGATGTTTTCATTATTAATACTTTCTTGCA CTCATACTCAAAATGGGGTCTTATTAGTGATGCACAGAAACTGTTTGATACTATGCCTCATAGAAACCTGGTTACCTGGTCTTCTATGGTTTCTATGCAT ACTAAACATGGTTACAGTGTAGAAGCACTAGTGTCATTCTGCCGGTTCAGAAGGAGTTGCAATGAGAAACCAAATGAATACATTTTAGCCAGTGTCATTC GAGCTTGTACGCAATTAGGTAGTCTTAGTCAAGCTCTGCAGGTGCATGGTTTTGTTCTTAAGGGTGGATTTGTTCAAGATGTTTATGTTGGTACCTCTTT GATTGATTTTTATGCCAAGCATGGTTATATGGATGAAGCAAGGTTGCTTTTTGATAGCCTAGAAGTGAAAACCACTGTTACCTGGACTACAATTATAGCA GGGTATTCAAAACAGGGAAGGAGTGAAGTGTCGTTCAAATTATTCAACCAAATGAAAGACGGTGATGTCTGTCCAGACAGATATGTAATTTCCAGTGTTT TGAGTGCTTGTTCAGCACTTGGGTTTCTTGAAGGGGGGAAACAAATCCATGGCTTTGTATTAAGGAGGAGAATTGATATGGATGTTTCATTGCTCAACGG ACTTGTAGATTTTTATTTGAAGTGCCACAAAGTGAAGACAGGCCGGATATTATTTGATCGGCTGGTAGATAAAAATGTTGTTTCATGGACCACGATGATT GCTGGTTGCATGCAAAATTCATTCCACTGGGATGCCATGAACCTGCTTGTTGAAATGGCTAGAATGGGTTGCAAGCCAGATGCATTTGCTTGCACTAGCA TTCTCACTTCTTGTGGTTCACTTCAGGTTCTAGAAAAGGGAAGACAGGTGCATGCCTATACTATCAAAGCCAATATTGATAATGATGATTTTGTGAAAAA TGGTTTGATTGACATGTATGCAAAGTGTGATTTATTGACTGATGCAAGGAAAGTCTTTGACCTTGCTTCTGCTATCAATGTAGTATCCTACAATGCAATG ATAGAAGGATATTCAAGACAAGACAAGTTGCATGAAGCATTGGATCTTTTTCGGGAAATGAGGCTAAGTTCAGTGCAACCAGTTCTATTAACGTTTGTAA GCTTACTTGGGCTATCTGCTTCCTTATTTCACCTGAAACTAAGCAACCAAATCCATGGCTTGATTATTAAATATGGGGTTTCTTTAGACAATTTTGCTGG AAGTGGTCTAATAGATGTTTATTCAAAATGCTTATGTGTTGGGGATGCAAGACTTGTTTTTGAGGAGATATATGACAAAGACATTGTAGTATGGAATGCA ATGTTTTCTGGATATACCCAACAATTGGAAAATGAGGAAGCTCTCAAACTTTACAAAGATTTACAGTTGTCAAGACTAACACCCAATGAATTCACTTTTG CTGCTGTAATCACGGCAGCAAGTAATATAGCGAGTTTGCGACAAGGTCAACAGTTTCACAACCAGGTTATAAAGATGGGTCTTGATGATGATCCCTTTGT CACCAATGCTCTAGTGGATATGTATGCCAAGTGCGGAAGCATTAAAGAGGCTAACAAGGTATTTAGTTCTACGAATCAGAGAGACATTCCTTGTTGGAAT TCCATGATTTCAACCTATGCCCAGCATGGAGAAGCAACAAAAGCTCTTGAGGTGTTTGAACGCTTGATTAAGGAGGGACTAAAGCCAAATTATGTCACCT TTATAGGTGTGCTATCAGCATGTGCCCATGCTGGACTTGTTGATCTTGGATTTCATCATTTTGAATCAATGTCCCACTTTGGAATTGAAGCGGGAACAGA ACATTATGCGTGCATGGTTTCTCTCTTGGGTCGAGCTGGTAGAATACATGAAGCTAAAGAATTCATCATGAATATGCCAATAAAACCAACAGCAGTAGTA TGGAGGAGCTTGCTCAGTGCATGTAGAGCTTCAGGTCATGTTGAACTGGGAGCATATGCAGCTGAGATGGCAATTTCATGTGACCCTGCAGATAGTGGAT CATATATATTACTTTCAAATATTTTTGCATCAAAAGGTATGTGGTTAAATGTGAAGAGGGTGAGAGAGAAAATGGACATAAGCGGGGTAGTGAAAGAACC AGGTTGTAGTTGGATAGAAGTGAATAATGAAGTTCACAGGTTCATTGCTAGAGACACATCCCATCGTGACACCACACTTATATCTTTAGTGTTAGATAAT TTGATTTTGCATATCAAAGGTCTTGGTTCTGTGGCTAACACGGCTGCAATTTTGCTTAATGATCGAGATGAATCAATCATAATGTGATTATATCACAATT AGGAAAGTTTTTGCTTTCCTCAAAAACTATGAAGTAAAATTTTGTGTACACTGCTTGCTACTTTGTTAAGGAATATTGGGCTTCAAACTGTTTTCATCCA GAAGATTCTTTTTACAAGTAAAGAATGTTAGTTTTGTGGTACATGTAAAGTTGAGCTCATTCTGTGTCAGCAAAGTATGTGACTGTCTAGTGGTTTTTCC ATTGCTTTGAATCATAGCAAGTTGGCAACCATATTCAAACTTTGTTGCCTCACATAACCAAAGACATGTTTTCTTGCAACTGACAAATCAAGGGAAAAAC AACCTTCAGTCCATTTAGCAGGCCAATACTCCTCCAGAATCCAGATCATAACTGGAATTATCCATTAAACTACTTGAAACCCAATCCAGCATAGACCCTA TGAAGAAATTGCTTCTTTTACAAGAAGAATTGGTTCAAATCCAAACAAAAGAAGCAAGTGGACAGTCTCTCAAAACATGAATACTTGTCTCTGTTTTAGA AGGGCAATTGTGAGTTATTTAAAGTATTCATTACATAGATTCTGTTTTAAATAATAATTAATCAACTTTCTGTGTATTAAATGTTTAATTAGATTAAATT TTTAAATAGAGCAATATTATTTATTTA
• Tissue: flowers
• Gene name: LI_gene_14679;
• Additional information: details;

Expression of Ll_transcript_117867

FPKM

• FPAB: 0.3
• FPNAB: 0.8
• LF1: 0.5
• LF2: 0.4
• LF3: 0.6
• LF4: 0.4
• UF1: 0.6
• UF2: 0.5
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_117867

• Blastp: Pentatricopeptide repeat-containing protein At4g39530 from Arabidopsis with 56.58% of identity
• Blastx: Pentatricopeptide repeat-containing protein At4g39530 from Arabidopsis with 56.58% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT4G39530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463554.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;