Id Trinity | FTRINITY_DN47028_c0_g1_i3 |
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Name Transcript | Ll_transcript_107550 |
Sequence | GTTCCTCACCAAATAACAATGGCTACGCAATCTTATCTTCTTAACTCTCTTTATGTCACTGGATTGCAACCTTCAATTCTCAAGCCAACCAATTTTGGAT TCTCTCAAAGTTCAAAATATCCTACTAAACGAAAGGCGAATCCCAGTGCTTCGGGAGCCGTGCAATGCTGCTCATGTCACACAGAAATATTGTATGCAGC TACAATACAGAATTCTCTTGATTCAGATGCCTTGAACACTCTCAAACTAAGCATACCAGGAACATTATGTCCTTCCACAGATTTCTTCTCCGGGTTGGTT CTTGCCGATCTGGATCCTGGTACTGCCAAGTTAGCTATTGGATTTCTAGGACCATTTCTCTCAGCTTTTGGTTTTCTTTTTATCTTGAGAATAGTCATGT CTTGGTACCCAAAACTCCCTGTGGGAAAGTTTCCATATGTAATAGCTTATGCTCCCACAGAGCCACTTCTGAGTCCTACCAGAAAAGTGATTCCTCCCCT TGCTGGTGTGGATGTTTCTCCTGTGGTCTGGTTTGGATTGATCAGTTTTCTTAATGAAATATTGGTTGGTCCACAAGGATTACTTGTTCTCCTTTCCCAA AAAATCAATTAGCTTCTATATTTATAGTTTGTGAAGAATGAGATATGGTGATATTTTATCCAATCTTGTTGGATTTATACATAAGTTGCATATGTGAATA ACAATGTTTTTCTTCCTTCACATTTGCCATCTAGAATCATGTTTGAAGATATAAATATTGTTTAGACTTTAGACTTCATACTAACATGTCTGACAATTTC ATATAATCATGTTTGGAGCCTCTAGAATCAAGTTGGAAGTAAGAAAATGTAGCTTTTATGTTTCAAAAAAA BLAST |
Tissue | flowers |
Gene name | LI_gene_15323; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_107550
Blastp | Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic from Arabidopsis with 81.65% of identity |
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Blastx | Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB3, chloroplastic from Arabidopsis with 81.65% of identity |
Eggnog | integral membrane protein(COG0762) |
Kegg | Link to kegg annotations (AT5G36120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449789.1) |
Pfam | YGGT family (PF02325.16) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |