Ll_transcript_107560

• Id Trinity: FTRINITY_DN47061_c0_g1_i1
• Name Transcript: Ll_transcript_107560
• Sequence: CAATACCCTAATGAAAGATACATAGTGAGGCAGCAGGTTGGTGCGTGGGTGAAAGAGCAGTAGAGTATGGTGACGGGTTCCATAAACGACGTGGTGAGTT CAATTGATATGGAAAAAATGCTGTGCGAATTGTTGGTGGATACGAAGCAACCAATTTGTGAGCGATTCAGAGCTCTCTTCTCTCTCCGTAACCTCAAAGG TCCTGCCCCTCGCGATGCCCTTATTCGAGCTACAAGGGATTCATCTAATTTGTTGGCACATGAGGCTGCTTTTGCACTTGGTCAAATGCAGGAAATCGAA GCCATTCCTGCTTTGGCCTCAATTCTAAATGATCTTTCTTTGCATCCTATTGTTCGCCACGAGGCAGCTGAAGCACTTGGTGCTATTGGCTCAGATAGTA ATCTCCCCCTTTTGGAGAATAGTTTGGATTTGGATCCTGCTGAAGAGGTTCGTGAAACATGTGAATTGGCTCTTCAACGTATTCGCCACTTCAAACATGC TGCTATTAGTCATCAATTATCTGCACCCGATGCGTCGCCTTTTAAGTCTGTTGATCCAGCTGCTCCTGCAACCTCTTCTTTGTCTGTTCATCAACTAAGG AAACTGCTTCTGGATGAAGAAAAAGGGATGTATGCCCGATATGCAGCTCTTTTCGCGCTTAGAAATGACGGTGGAAAAGAAGCTGTTGCTGCTATTATTG ATTCCTTAGGTTCTAAAAGTGCTCTCCTGCGCCATGAGGTTGCATATGTTTTGGGCCAATTGCAAGACAAAGTCGCTTCAGCTGCTCTGTCCAATATACT TAAAGATGTGACTGAGCACCCAATGGTTAGACATGAGGCTGCTGAAGCTCTTGGTTCAATTGCAGGTATTACAATTTACAACCAAATACCATTGAAAGTT CTGTTTTTTTTTAAATTAATATAATCTATTAATTAAAGGAATGATGTGCATTAGGGTGCTATCTGTGCTTTAAAGCAGAAATTTGTTTGTAATATAGAAC CGAGGAGTAGATAGCAGAACACAGTAAATTTTGGGGGTAAATTGCTGTCAAAGTAAATTTAGATTACAACTTGTAGTTTTCCTTATGATTCTGTTCATAT TTGTGTGTGTGGTTGTGACTTGTCCTGGTCAAAAGTAGCCTCACTCTCATCCAGCTGACAATTAAATTAATAAATGTAAAGGTATCGTTGGATATGGCAT GTGCACCTGTAACTATGGAATCCACTGTGATGAATGAAATCACTGTCTTTCAGTTTGAGATGTAAAAAATTTCTAGCACTGTTTACATTTGGGACTGTTT ACATAGCTCTTTCCTTGTAGATGAGCAAAGTGTGGCCCTTCTTGAGGAGTTTACAGCAGATCCAGAGCCTCTTGTCTCACAAAGCTGTGAAGTTGCCCTA AGCATGCTAGAATTTGAACGGTTAGGGAAGTCATTTGAGTTCCTCTTCATGCGCAATCCAGTTGTGCATGGTGATGCCTCTTCATAAGGCGCCATGGTTT GCATGTTCATCCTCGACCTCAAGGATGAGGAGCACTTGTAATGTTTCAGTTCTATTTTGCTTGTTATGACTGTAATGTTTGTGCGGATGTGCCACCTTAA TTACATATTATTATTGTGTGTTACTGTTTAAAGCTATGGCTCTTCGTTTGTCATTAAAATAGGTGGCAGTGTATTAAGTTAGAGTCAGACTTGTATCTTC AAAGACATGGCTAATACTAAAGCTATGGCTCTTCATTTCACAAGTACAACTCAATATATGAAAGACAAGGCTAAGACTTGTATCTTCAAAGACATGGCCA ATATCTTCAACCCAAGTTTGTTCGAAAACATATACTGTTTTCCAATGAAAACATGGAATTTTTTATTTCTCAGGCAAAACTTCACCATGGAACTTGTATT CTACACGTAGTAGCATGCCACTTATGGTATGATTGTGAATTTTTATCTGGATAGCAATGAAAGAAGATAAAGTCTTAGGAGCTATGAC
• Tissue: flowers
• Gene name: LI_gene_15367;
• Additional information: details;

Expression of Ll_transcript_107560

FPKM

• FPAB: 0.2
• FPNAB: 0.2
• LF1: 0.3
• LF2: 0.1
• LF3: 0.3
• LF4: 0.2
• UF1: 0.1
• UF2: 0.2
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_107560

• Blastp: Deoxyhypusine hydroxylase from Arabidopsis with 72.14% of identity
• Blastx: Deoxyhypusine hydroxylase from Arabidopsis with 72.14% of identity
• Eggnog: Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (By similarity)(COG1413)
• Kegg: Link to kegg annotations (AT3G58180)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426176.1)
• Pfam: HEAT repeats (PF13646.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;