| Id Trinity | FTRINITY_DN47185_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_40191 |
| Sequence | CGAAGTTGCTTGAGGGCTTCATCTCTTTCCCCAAGAGCATAAGCAACCGATTCAACTCTGATCTCACCAGGCAGAAAACTGAGAATAGTAGGGGGTTTCC GACCATAGACCACCTCAAAGGGAGTGGTGTTGATTGAAACATGCCATGTAGTATTGTAGTACAATTCAGCCCATGGGAGCCAATGTGACCAGTTCTTGGG CTGTTCCCCTGCAAAACAGCGTAAATAAGACTCCAGGTATCTATTTGTAACCTCTGTTTGGCCGTCAGTTTGTGGGTGATAAGAGGAACTCAAACAAAGT TTGGTTCCATACAGCTTGAACAATTCTGTCCAAAAATGGCTGATGAAAATGGGGTCTCTGTCACTGACAATGGATTTAGGAATCCCATGAAGCCTTGCAA TCTCTTTCATGAATATCTCCGCCACCCCTCGAGCAGTATAAGGGTGTTTCATTAGTATGAAGTGTGCGTACTTAGAGAGTCTATCTACTACTACTAAGAC CACCTCATATCCCCTTGATTTGGGCAATCCTGAGATAAAGTCGAGGGAGATATCATCCCAAATAACCTCTGGAATTTGTAGAGGCTGGAGTAGACCAGCG GGAGCTAGAGTAGATGTTTTGTAACGTTGACATATATCACATGCTTTCACAAATTCCTGGACAGTTCTCTTCATCCCAACCCAATAAATATTTTCCGCCA ATTTGCGATATGTGCGATAGTAACCCGAGTGTCCCCCTTGGGGAGTGCTATGGAACTCATGTAGTAGCTTAGGAATCCAAGGGGAAGTTGCGGAAAGCAC CAATCTGCCTTTGTACCTGAGTATTCCATGGGTCAATGTAAACCCTTCTTTGGTATTGATCCCTTGCTGGATGTTGGATCTATGTTGATTCAAATGGGTA TCACCTTGAATTCCTTCTAGGAAATCCTGTCCAGCCATCCACAATGGTGCAGAATTTATGAAAGAAAGTTCAGAATCATTCTCCTTGCGGGATAACGCAT CTGCTGCAGTGTTTTCTTTACCCGGTTTATACTTCACATCAAATTGGTACCCCAATAACTTTGCTATCCAGCATTGTTGATCAGCGGTAGTGATGCGTTG GTGCAACAAGAATTTGAGGCTCTTATGATCAGAGTATACTAAGAACTGTCTTCCCAACAAATAGGGTCTCCAATGTTGTATGGCCAAAACAAGAGCCATG ATCTCTTTCTCATAAGTAGATTTAGAGAGGTTTTTTTCTGCTAAAGCCTTACTGAAATAAGCAATTGGCTTTCGCTCCTGCATTAACACCGCCCCAATAC CGCGACCAGAAGCATCACACTCCACTTCAAATAGCTTGGAAAAGTCAGGCAAAGAGAGGACAGGAGCTTCAGTGATCACTTTCTTAAGTCGGTTGAAGGC CTCATTAGCTTCCTCATTCCATTTGAAACTGTCTTTCTTGGTTAATGCAGTAAGTGGTTGAGCAATCTTCCCATATCCCTTGATAAATTTGCGATAGTAT CCCGTGAGCCCGAGGAACCCTCTGACACCCTTGACATTGGTTGGAATTGGCCAATCCAATACTGTTTGTATTTTGGAAGGATCCATAGCAACACCTGCAT GAGAAATTATGTGTCCCAAATATTCCACCTCTCTAGTTGCAAAGTGGCACTTTTTCTTATTAACATAAAACTGATTTTCCTGTAGAATTCTCATAACAGT GTCTAGGTGTGATAGGTGAGAATTCCAGTCAGTACTATAGATTAGTATGTCATCAAAGAAAATAAGGACTTACGGAGTAGGTGTCTAAATGTTTCATTCA TGGTGGCTTGGAAGGTGGCTGGTGCATTGGAGAGGCCAAAAGGAATCACCAAATACTCATAATGTCCACTATGAGTACGAAATGCCGTATTTTCTATGTC CCTTTCCTGCATCCGGATCTGATGGTAACCAGATTTGAGATCAAGTTTAGTGAAGTACGTCGCACCATTTAATTCATCCAACAGTTCCTCAACCACTGGT ATGGGAAATTTGTCTGGTATTGTAGCTTTATTGAGAGCTCTATAGTCTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_15510; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_40191
| Blastp | Transposon Tf2-11 polyprotein from Schizosaccharomyces with 31.48% of identity |
|---|---|
| Blastx | Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 33.39% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPBC1289.17) |
| CantataDB | Link to cantataDB annotations (CNT0002695) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020207083.1) |
| Pfam | His(2)-Cys(2) zinc finger (PF09337.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |