Ll_transcript_116162

• Id Trinity: FTRINITY_DN47295_c0_g1_i2
• Name Transcript: Ll_transcript_116162
• Sequence: AAGACAACACACACTTCTCCTTTCTTCTCTCATTCTTCCCCAATTCTGAACCCTAAATCATCACCTCCGATCACCACTTCCGACCACCGCCACCGCCGTC GTCGCAGGTCCTTCATTCTCTCTCGTCGATTTATTTCCAAATATTCAGTGAGTTTCTTGTAAACTGTTTGGTGAAGCCTACGAATCGGTTGGATCAATGT ATCAGTGGAGGAAGTTTGAGTTCTTTGAGGAGAAGTATGCTGCAAAATGCACTATTCCTGATGAGGAGGTGGAGAATAGTGATGGTGGTGTTGTTGCTAA CAAGAACAAGAAGATTCAGTGTTGTTCAAGTGGCAGGGGAAAGGTGGTGACTGGCATCGATGATGGGACGGTTTGCTTGTTTGATCGAGGCCTCAAGTTC AATTATGCATTTCAACCTCACTCCTCTTCTGTTCACTTTCTTCAGCAGCTCAAGCAACGCAACTTTCTGGTAACCATTGGTGAAGATGAACAGCTTACTC CCCAACAATCAGCTTTGTGCTTAAAGGTTTTTGACCTTGATAAGATGCAAGCTGAGAGTTCAAGCACGGCGAGTCCTGATTGCGTTGGGATATTGCGAAT ATTCACTAGTCAGTTTCCTGAGGCAAAGATTACTTCTTTTTTAGTCTTGGAAGAAGTGCCACCAATACTACTCATAGCTATTGGCTTAAATAATGGTTCT ATTTACTGCATAAAAGGAGACATTGCCCGAGAGCGTATCAACCGTTTCAAGCTTCAGGTGGAAAACCATTCTGACAAAGGTCTTTCCTGTGTTACTGGTC TTGGGTTTAAGGTGGATGGTCGATCTCTACAATTATTTGCTGTAACTCCAAGCTCAGTGAGCTTGTTCTCATTGCATGATGAGCCACCAAGAAGGCAAAC ACTTGATCAGATTGGATGTGGTCTAAACAGCGTTGCAATGAGTGACCGCTCTGAATTGATAATTGGTCGATCAGAAGCAGTGTATTTTTATGAAGTTGAT GGTCGTGGTCCTTGTTGGGCTTTCGAGGGAGAGAAGAAATTGATAGGATGGTTTCGTGGATACCTTCTGTGTGTTATTGCAGATCAAAGAATGGGAAATC ATACTTTCAACATCTATGACTTGAAGAATCGTTTAATAGCCCACAGTGTGTTGGTTAAAGACGTTTCTCACATGCTCTATGAATGGGGTAACATCATACT CATAATGGCTGACAAATCAGCTTTATGTATTGGGGAAAAGGATATGGAAAGCAAGTTAGACATGTTATTTAAGAAAAACCTATATACTGTAGCAATTAAT CTTGTTCAGACTCAGCAAGCAGATGCTGCAGCTACTGCTGAAGTGCTAAGAAAATATGCTGACCATCTATATAGCAAGCAAGACTATGATGAGGCAATGG CTCAGTACATACAAACTATTGGCCACCTTGAACCTTCTTATGTGATACAGAAGTTTTTGGATGCACAAAGAATCTACAACCTCACAAATTACTTGGAAAA GCTACATGAGAAGGGTCTTGCTTATAAAGATCACACTACACTTCTGTTGAACTGTTACACCAAATTGAAAGATGTTGAAAAGTTAAATCTATTTATTAAA AGTGATGACAGCATCGGGGAACTTAAGTTTGATGTGGAAACAGCACTCAGGGTTTGCCGTGCTGCCAATTACCATGAGCATGCAATGTATGTTGCAAAGA AGGCAGGGAAGCATGAGTGGTACTTGAAGATCTTGCTCGAAGATCTTGGTAGATATGAAGAGGCCTTGGAATATATTTCAAGTCTTGAATCAAGTCAGGC AGGGATGACAATAAAGGAGTATGGTAAAATTCTAATAGAGCACAAGCCAGTTGAGACAATTGAGATTCTCATAAGGCTTTGTACAGAAGATGAAGACAGA AGAGGAGACTCAAATGTTATATATGTATCTATGTTGCCATCTCCTGTTGATTTTCTTAGCGTTTTCATTCATCATCCTCAGTCCCTTATGGATTTTCTTG AAAAATATACCAATAAGGTCAAGGATTCGCCTGCTCAAGTGGAGATTCACAATATCCTATTAGAACTGTATATAGCCAATGAATTGAACTTTCCTTCAAT GTCACAAGTTAATGAGGATGTAGAGTATGTTAATGTACCATCTGCTAAAACTCTGATTTTAAGTTCTCAGTCTAATGGAACCATTGCTGATCACAAAGGC TCACAAGAGGAAACAGACCGTCTTGAAAGGCGTAAAAAGGGTCTAAGCTTGCTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTTTATGATGTTG ATTTGGCAATTATACTGTGTGAAATGAATGCATTCATAGATGGGATCTTGTATTTGTATGAAAAGATGAAACTCTATAAAGAAGTAATTGCTTGCTATAT GCAGAAACATGATCATGAGGGGCTAATTGCATGCTGCAAAAGGCTGGGGGATTCAGGTAAAGGTGGGGATCCGTCTCTTTGGGCTGATGTACTTAAATAT TTTGGTGAGCTTGGAGAAGATTGCTCCAAAGAAGTAAAAGAAGTTTTGACGTATATCGAGAGGGATGATATTTTGCCCCCCATGATTGTCCTTCAAACAC TTTCGCGAAATCCATGCCTCACACTTTCTGTAATCAAAGATTACATTGCTCGGAAGCTTGAGCAGGAATCAAAGATGATTGAAGAGGACCGACAAGCTAT TGATAAATATCAGGAAGATACACTATCGATGAGAAAAGAGATTCAAGATCTTAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCTTGCACA TTCACTCTTGATCTCCCTGCTGTGCACTTCATGTGCATGCACTCGTTCCATTTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCTCCTG AATATAGGTCCGTCATTGAAATGAAAAGAAATTTGGAGCAAAATTCTAAGGACCAGGACAGGTTTTTCCAGCAAGTGAAGAACTCCAAAGATGGGTTTTC TGTCATTGCTGAGTATTTTGGAAAAGGGATCATCAGCAAAACAAGAAACGGATCCACTTCTGGTCTTGGTTCTGGAAATTCAACATCCAGTAGTGTCATC TGAGCTTTACAATTTGTGTCACTTCTATTTCATCACTTTTCTGGATATTAGATGAAGTTGATTGTCTTTGGGCTATCTTCTCCATCACTGCTTGTTGTAA ATAAAGCCTACATAATCTGGATTCCAAGGTTTATACTTTGACTGTTTTCTAAATGTGCTGGCTGTTAATATTTATATCAGGGAAAAGTCCAAAAACAACT CCAAAATTGTGCATGATGTGTGATTTGGTCCCTGAACTTTGGTTCCGGTGCCGATAGGCCTTCCCTGTTCAAAAATGCTCATTGAACTTTGCATGATGTA CAAGTTAGTCCCTGAGCTCTCCTTCTTGCAACCGAACCTCAAAGTTCAGGGCCTTTTGACACATTTTTAAATTCAAGAACTAAATGGTGTATCATGCAAA GTTTGGGGTAGTTTTTTGACTTTTCCTTTTATATTATCCAGGTTGCTCATTCATCAAGTAAAGTTCCTGAATGGTCTTGCACTCTGTGTTATTGCAGAGT ATTGAACTTTTTGGAAGGAATTCAAGTGGACAAATAATAATTTATTGCAGCCTCTCCTTGGTTGAAATATTGGACAAATATTTAGGTCAATGTGTGGTTC AGTGGGTGTGAATTCAAGTGATACTTTTTCTTTTCTTTTCTTTTTTGTGTGTAAAATTATGAGGGATTGATTGAGATATTAAGATGAGATTTATATATGT ATTTTAATTTTTTTGCAAAGGCCATGCATGACAAATAGTAACAATATGAGTTCTGTGTTTTTGTCCACCATTTACTTCCTATTTATTTAACCTCAACTGG TGCTTGAGGTAGGATTGTTCATGGCACAATTTGGATAAATTTATTACATTTTAGAGCCTCTTCATAGTTATAT
• Tissue: flowers
• Gene name: LI_gene_15662;
• Additional information: details;

Expression of Ll_transcript_116162

FPKM

• FPAB: 0.7
• FPNAB: 1.1
• LF1: 1.2
• LF2: 1.6
• LF3: 1
• LF4: 0.7
• UF1: 0.8
• UF2: 1
• UF3: 0.6
• UF4: 0.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_116162

• Blastp: Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75% of identity
• Blastx: Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75.32% of identity
• Eggnog: Vacuolar Protein(ENOG410XRNZ)
• Kegg: Link to kegg annotations (AT2G05170)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461160.1)
• Pfam: Region in Clathrin and VPS (PF00637.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;