| Id Trinity | FTRINITY_DN47295_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_116165 |
| Sequence | AAGACAACACACACTTCTCCTTTCTTCTCTCATTCTTCCCCAATTCTGAACCCTAAATCATCACCTCCGATCACCACTTCCGACCACCGCCACCGCCGTC GTCGCAGGTCCTTCATTCTCTCTCGTCGATTTATTTCCAAATATTCAGTGAGTTTCTTGTAAACTGTTTGGTGAAGCCTACGAATCGGTTGGATCAATGT ATCAGTGGAGGAAGTTTGAGTTCTTTGAGGAGAAGTATGCTGCAAAATGCACTATTCCTGATGAGGAGGTGGAGAATAGTGATGGTGGTGTTGTTGCTAA CAAGAACAAGAAGATTCAGTGTTGTTCAAGTGGCAGGGGAAAGGTGGTGACTGGCATCGATGATGGGACGGTTTGCTTGTTTGATCGAGGCCTCAAGTTC AATTATGCATTTCAACCTCACTCCTCTTCTGTTCACTTTCTTCAGCAGCTCAAGCAACGCAACTTTCTGGTAACCATTGGTGAAGATGAACAGCTTACTC CCCAACAATCAGCTTTGTGCTTAAAGGTTTTTGACCTTGATAAGATGCAAGCTGAGAGTTCAAGCACGGCGAGTCCTGATTGCGTTGGGATATTGCGAAT ATTCACTAGTCAGTTTCCTGAGGCAAAGATTACTTCTTTTTTAGTCTTGGAAGAAGTGCCACCAATACTACTCATAGCTATTGGCTTAAATAATGGTTCT ATTTACTGCATAAAAGGAGACATTGCCCGAGAGCGTATCAACCGTTTCAAGCTTCAGGTGGAAAACCATTCTGACAAAGGTCTTTCCTGTGTTACTGGTC TTGGGTTTAAGGTGGATGGTCGATCTCTACAATTATTTGCTGTAACTCCAAGCTCAGTGAGCTTGTTCTCATTGCATGATGAGCCACCAAGAAGGCAAAC ACTTGATCAGATTGGATGTGGTCTAAACAGCGTTGCAATGAGTGACCGCTCTGAATTGATAATTGGTCGATCAGAAGCAGTGTATTTTTATGAAGTTGAT GGTCGTGGTCCTTGTTGGGCTTTCGAGGGAGAGAAGAAATTGATAGGATGGTTTCGTGGATACCTTCTGTGTGTTATTGCAGATCAAAGAATGGGAAATC ATACTTTCAACATCTATGACTTGAAGAATCGTTTAATAGCCCACAGTGTGTTGGTTAAAGACGTTTCTCACATGCTCTATGAATGGGGTAACATCATACT CATAATGGCTGACAAATCAGCTTTATGTATTGGGGAAAAGGATATGGAAAGCAAGTTAGACATGTTATTTAAGAAAAACCTATATACTGTAGCAATTAAT CTTGTTCAGACTCAGCAAGCAGATGCTGCAGCTACTGCTGAAGTGCTAAGAAAATATGCTGACCATCTATATAGCAAGCAAGACTATGATGAGGCAATGG CTCAGTACATACAAACTATTGGCCACCTTGAACCTTCTTATGTGATACAGAAGTTTTTGGATGCACAAAGAATCTACAACCTCACAAATTACTTGGAAAA GCTACATGAGAAGGGTCTTGCTTATAAAGATCACACTACACTTCTGTTGAACTGTTACACCAAATTGAAAGATGTTGAAAAGTTAAATCTATTTATTAAA AGTGATGACAGCATCGGGGAACTTAAGTTTGATGTGGAAACAGCACTCAGGGTTTGCCGTGCTGCCAATTACCATGAGCATGCAATGTATGTTGCAAAGA AGGCAGGGAAGCATGAGTGGTACTTGAAGATCTTGCTCGAAGATCTTGGTAGATATGAAGAGGCCTTGGAATATATTTCAAGTCTTGAATCAAGTCAGGC AGGGATGACAATAAAGGAGTATGGTAAAATTCTAATAGAGCACAAGCCAGTTGAGACAATTGAGATTCTCATAAGGCTTTGTACAGAAGATGAAGACAGA AGAGGAGACTCAAATGTTATATATGTATCTATGTTGCCATCTCCTGTTGATTTTCTTAGCGTTTTCATTCATCATCCTCAGTCCCTTATGGATTTTCTTG AAAAATATACCAATAAGGTCAAGGATTCGCCTGCTCAAGTGGAGATTCACAATATCCTATTAGAACTGTATATAGCCAATGAATTGAACTTTCCTTCAAT GTCACAAGTTAATGAGGATGTAGAGTATGTTAATGTACCATCTGCTAAAACTCTGATTTTAAGTTCTCAGTCTAATGGAACCATTGCTGATCACAAAGGC TCACAAGAGGAAACAGACCGTCTTGAAAGGCGTAAAAAGGGTCTAAGCTTGCTTAAGAGTGCATGGCCTCCAGAGACAGAACATCCACTTTATGATGTTG ATTTGGCAATTATACTGTGTGAAATGAATGCATTCATAGATGGGATCTTGTATTTGTATGAAAAGATGAAACTCTATAAAGAAGTAATTGCTTGCTATAT GCAGAAACATGATCATGAGGGGCTAATTGCATGCTGCAAAAGGCTGGGGGATTCAGGTAAAGGTGGGGATCCGTCTCTTTGGGCTGATGTACTTAAATAT TTTGGTGAGCTTGGAGAAGATTGCTCCAAAGAAGTAAAAGAAGTTTTGACGTATATCGAGAGGGATGATATTTTGCCCCCCATGATTGTCCTTCAAACAC TTTCGCGAAATCCATGCCTCACACTTTCTGTAATCAAAGATTACATTGCTCGGAAGCTTGAGCAGGAATCAAAGATGATTGAAGAGGACCGACAAGCTAT TGATAAATATCAGGAAGATACACTATCGATGAGAAAAGAGATTCAAGATCTTAGGACAAATGCTAGAATTTTTCAGCTTAGCAAGTGCACTGCTTGCACA TTCACTCTTGATCTCCCTGCTGTGCACTTCATGTGCATGCACTCGTTCCATTTGCGCTGCCTTGGTGATAATGAAAAAGAATGCCCTGAGTGTGCTCCTG AATATAGGTCCGTCATTGAAATGAAAAGAAATTTGGAGCAAAATTCTAAGGACCAGGACAGGTTTTTCCAGCAAGTGAAGAACTCCAAAGATGGGTTTTC TGTCATTGCTGAGTATTTTGGAAAAGGGATCATCAGCAAAACAAGAAACGGATCCACTTCTGGTCTTGGTTCTGGAAATTCAACATCCAGTAGTGTCATC TGAGCTTTACAATTTGTGTCACTTCTATTTCATCACTTTTCTGGATATTAGATGAAGTTGATTGTCTTTGGGCTATCTTCTCCATCACTGCTTGTTGTAA ATAAAGCCTACATAATCTGGATTCCAAGAGTATTGAACTTTTTGGAAGGAATTCAAGTGGACAAATAATAATTTATTGCAGCCTCTCCTTGGTTGAAATA TTGGACAAATATTTAGGTCAATGTGTGGTTCAGTGGGTGTGAATTCAAGTGATACTTTTTCTTTTCTTTTCTTTTTTGTGTGTAAAATTATGAGGGATTG ATTGAGATATTAAGATGAGATTTATATATGTATTTTAATTTTTTTGCAAAGGCCATGCATGACAAATAGTAACAATATGAGTTCTGTGTTTTTGTCCACC ATTTACTTCCTATTTATTTAACCTCAACTGGTGCTTGAGGTAGGATTGTTCATGGCACAATTTGGATAAATTTATTACATTTTAGAGCCTCTTCATAGTT ATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_15662; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_116165
| Blastp | Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75% of identity |
|---|---|
| Blastx | Vacuolar protein-sorting-associated protein 11 homolog from Arabidopsis with 75.32% of identity |
| Eggnog | Vacuolar Protein(ENOG410XRNZ) |
| Kegg | Link to kegg annotations (AT2G05170) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461160.1) |
| Pfam | Region in Clathrin and VPS (PF00637.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |