Ll_transcript_243638

• Id Trinity: FTRINITY_DN47307_c0_g1_i1
• Name Transcript: Ll_transcript_243638
• Sequence: ATTCATTTGTTTCATAATCAATAAAAAATATCTATCTCATCACTATCCCCTACAAAAATACCATTTCCATAAAGATAAGGTCTTTAACAATTTCTATCTC CTCTTCAGAACCAAACCATCTCCAACAATGGCTGCTCCTCTGTCCACCACAATATCTATCGACCCCAGCACCAGAACACGCTTTACCATTGTCACCCCTC TCACCTTCACACACAGAAATTTTTCCATACACTGCACCGCTTCTGAATCCATTCCACAAACTCCTCCTACATCAACCACTTCAAACACCAAGAATAAGAA GAACAACAACAAAAATTCTTCTCTTTTCGACCAACTCTCACCCCTTGCAAACACCACCTTGTCTAACACAACATCAAAAGATCAATCATATGTCTTATCC AAACCAAAATCCACATGGGTCAACCCCACCAAACAAAAACGTTCTGTCCTTTCACAGCAGAGGCACAAACGTGTTCCTTACTCCTATAGTCCACAGCTCA GAGATTTCAAACTCTTTGCACAAAAGCTCAATGATTCTGGTGACTCTGAAGCTGAGTTTTTGGCTTGTCTTGGAGAAATCCCACATGAGCTTACAAGAGA AAATGCACTCTTGATACTCAATAGTTTGAAGACATGGCAAAAAACACTACTTTTTTTCAATTGGATTAGGACCCAGAATTCGCTTCCTATGGAAACCATA TTCTACAATGTCACGATGAAGGCTTTGAGGTTTGGGAGACAGTTTGGGAAGATTGAAGAACTTGCACACCAGATGATTGATGAAGGGACTCAACCAGATA ACATTACTTACTCAACAATCATAACTTGTGCTAAGAAGTGTAATCTTTTTGACAAGGCTGTGCAGTGGTTTGAGAGGATGTACAAGACTGGTTTAATGCC AGATGAGGTCACTTACTCAGCTATCTTGGATGTTTATGCTAAGCTAGGTAAAGTTGAAGAGGTCATAAATTTGTATGAGAAAGCTAGAGCAACTGGGTGG AAACCTGACAATATCACATTCTCTGTGTTGGGGAAGATGTTTGGGGAGGCCGGGGACTATGATGGTATTAGGTATGTATTGCAAGAGATGAAGTCTATTG GGGTGCAGGCTAATTTAGTTGTGTATAATACCTTGTTGGAGGCAATGGGGAAAGCTGGGAAGCCAGGGTTTGCAAGGAGTTTGTTTGAAGAAATGATTGA TTTGGGGATAAGCCCGGATGAGAAGACTTTAACGGCACTTATTAAGATATATGGTAAGGCCCGGTGGTCTCGCGATGCACTAGAATTGTGGGACCGAATG AAGGAAAATCGCTGGCCTATGGATTTTTTTCTGTATAATACATTGTTGAATATGTGCGCAGATGTTGGGTTGGTGGAGGAGGCTGAAACTTTGTTCAGGG ATATGAAACAGTCTGAGCATCGCAAGCCAGACAGCTGGAGTTACACAGCAATGCTTAACATATATGGCAGTGAAGGAAATGTAGACAAGGCGATGAAATT GTTTGAAGAGATGTCTAAGTCTGGGGTTGAACTCAACATCATGGGGTGTACTTGTTTGATTCAATGCTTGGGAAAAGCTATGGAGTTTGACGGCGTGGTA AGAGTTTTTAACGTTGCAGTTGAGAGAGGAGTTAAGCTAGATGATAGGCTATGTGGTTGCTTGCTATCTGTTGTGTCTTTGTCTCATGGCAGCAAGCATG AGGAAAACATTCTTGCTTGTTTACAGCAGGCTAACCCAAAATTGGTTGCTTTTATTCAACTGATTGTGGATGAGGAAACTAGTTTTGAGACCATCAAAGA AGAGTTCAAGAATATCATGAGCAGTGCTGCAGTTGAAGTTAGAAGACCCTTCTGTAATTGCTTAATTGACATATGTAGAAACAAAGAACTCCAAGAGAGA GCCCACGAGCTTCTGTACTTGGGAACCTTGTATGGGTTGTACCCAAGTTTACACAACAAAACTGCCAATGAATGGCGTTTAGATGTTCGATCATTGTCAG TTGGTGCAGCTGAAACTGCATTAGAAGAGTGGATGTGGACACTCACCAAAATTGTTCGGCGGGAGGGGACATTGCCAGAGTTATTCCTAGCCCAAACTGG TAGCGGTACTCATAAGTTTGCCCAAGGACTGAACATTTCTTTTGCCTCTTATTTGAGGAAACTAGATGCTCCATTTAGGCAGAGTGAGGAAAAAGTTGGT AGTTTTATTGCAACTAGAAAGGATTTAGTCTCTTGGGTGCAATCGAAGTTTCCATCAGGTGCTATTGCAACATAGATGGTGGAAAAAGTTCTAGCGGCAT TCACCTTCATCCATATGGCTAATACATGAAGTGATATATTCAACTATTTCGAGGTTGAAGCTAGAGATGGCATGTAATCTTCCTCTCATTTTTTAGAATG TCAACACATTCTAAAATTTAGTATTCCTCGTTTCTTCTTTTTTTGTCTAGCACCTTACAAGTTTGGATAGAAGACTGAGGGAGTGCTGCTGTGAGTTGAT CATTTTATTAAATTCAATGAAGGGTGGGGGCATAAGCACTATAATATGTCTATTTACAGCTCTCCCTTTTTAAATTTTTATTGTACTTTTGAATTTTCAC TTAGTTGAGTTACTTTTTAGTTATCATTTTCGCTGTTAAATTTGCAAGATTCAATGTCAAGAGTTTAATCCATATCCAGATTTGAGGTGTTATATCATGG GAAACAGATATAGTATGATATCAATCATGAATAAACATTGATTGTTTTGTATGCTATCCTTGCTAGAAACTGAGGAGTCATTTAAAAAAACATTTTAGAG AAGAGTATTTCAGGAAGCTATACTTTGGTTGTTGTTTCGCGTGTTGGACATCAATGGCTTGTAGTGCTTTATCACACATAGAGGGTATGCTTTACTATGG TTTTTTTTCCATCAACACCGGCAATTTATTTATCAAAGTTCATCTGAGTCATAATCATGCAACCTGGAATTCTCTGCTGTCTACTTTGGCTGTGTCAACT TTAAATCTTGTCTTTCTATTTTCAATAAGTGATTGTATTATTGTATTCTTATTTTGTATTAATAGACAAATCAGAGTTTTCAAATGGTTGTAAAATGCAT AATGACAATGTTCACTAAGACTAAATTTCAGGTATTCTAGGAAAGATGGATTGTAGATCTCAACTACTTCAGTGCATGGAGTGCAGCTAGCTAAGGCAAT TCTGCAAAATCTGAAGGAAGATAAATATAAATGAGTGCACTTGATGAATAACTAGAAAGGGTCATGTGGTGGAGTCATCTTATGTGTTATTTGGGCTTGT CATTTTCCCTTCTATGATTTGAAACTTATTAGACAGTAAGAAAATGGCAAAGCAGAATATTAATGTCAAAACTGGTTTTCTTTTCTTTTTATTTGGTTTA TACCAAGGTTCCCTTGTTGACAGAGCAAAATTAACCTCTTTCATATAGAAATCACCCATTAGTTTTACCTCTACCATCAAAGTTTTATCCATGCTGGTAT TCATTTGAAATGCCTAAAATATTAGCATAATGAGTATGTTATTTG
• Tissue: flowers
• Gene name: LI_gene_15678;
• Additional information: details;

Expression of Ll_transcript_243638

FPKM

• FPAB: 1.8
• FPNAB: 3
• LF1: 5.7
• LF2: 6.5
• LF3: 4.5
• LF4: 5
• UF1: 7.9
• UF2: 7.3
• UF3: 5
• UF4: 6.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_243638

• Blastp: Pentatricopeptide repeat-containing protein At5g46580, chloroplastic from Arabidopsis with 63.52% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g46580, chloroplastic from Arabidopsis with 68.68% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G46580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445981.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;