Ll_transcript_271108

• Id Trinity: FTRINITY_DN47535_c0_g1_i1
• Name Transcript: Ll_transcript_271108
• Sequence: AATGTCTAAACCTTATACCAATAAAAAACACTAAAAGCTTGGGCCTAACTTAGACCCTAGGCTCATCATTTCTGGTCCAGATCAGAACCCCTCCTCCACC CACAACTTCCACAACCCCGCCGCTGCCATCTCACTCCACAACCACCGCCTCCTTCCCGGCGTAGCCACTCACGTAGCATAGAAAACGCGTCGCAGTGCTA GGGTTTAGTGCTGAGGACCAATCATGGGTGCTTCGGATCCCTCAAATGTTCCAATCATCAACGTAGAAGACGAGGTCGTAGGAGAAATAGTCGGCACCAC CGATTATTTCTTCTCGAAGATAGGAGACACTGTTCCACTTAAGAGCAATGGCTCCATTTTTGAATTCGAAACCCTACCTTCACATCCCCTCGCACTCTCC CAACGCTTACGCCTTATTTTCGTCGCTCATACTTCAGGATTTTTTGTGGTGAGGACCAAAGATGTTATTGATTCTGCTAAACAATTTAAGGACAAGGGAA CTGGTTCTTCAGTAGAGGAGCTCAGTCTTGTTGATGTTTCTATTGGTAGGGTTCACATTTTGGCTCTTTCTACCGACAATTCATTGTTGGCAGCTTCTGT TTCCGGTCAGATTCAATTTTACTTGGTTGATAGCTTTGCGAATAAGGAAGTGAAGCAATCCTTTTCATGTTCGCTTAGTGATGATTCGGCATTTGTTAAG GACATGAGATGGATAACGACGTTGGAGAATTCTTTTGTTGTCCTTTCAAATACTGGGCAGTTATATTATGGAGAGGCTGGTTTGCCACTTAAATCTGTGA TGGACAGTGTTGAAGCTGTTGATTGGGGTGTTAAAGGGGAATTTGTTGCTGTGGCGAGAAAGAATAATGTTCTAAGCATTTTGTCGGCGAAAAAGTTTGA AGAATGGGTTTCAATTTCGTTAAGCTTCGAATCCTGGATTGGTGATTCTGATGAAAATCGTAGTGTAAAAGTTGATTCTGTCAAGTGCATTCGATCTGAT TCGATTGTAGTTGGATGTTTTCAACTTGATGAGGATGGCAAGGAAGAGAATTATCTTGTCCAAGTTATTAGAAGCAGATCTGGTGAAATTACTCGAGGTT GTTCTGATTTTGTTGTCCAATCATTCTGTGATATGTACCAAGGATTATTTGATGACATTGTACCCTTTGGAAGTGGACCCTACCTTCTCTTGTCCTACAT AGAACAATGCCAGCTTGCAATCAACGCTAACATTAAGAATACGGATCAGCACATTATGTTGCTTGGATGGTCAGTAGATGATGATCATAAGAATGAACCG GTGGTTGTTGATATTGAACGAGATAATTTGGTGCCAAGAATTGAGCTTCAAGAAAATGGTGATGATAATTTGTTGTTGGGGCTATGTGTTGATAATGTTT CAATTTATGAGAAAGTTGGAGTTCAACTTGGTGTCGGGGAGGAAAGGACTGAGCTCTCACCATATTGTGTTCTTATATGTCTTACATTGGAGGGAAAACT TGCCATGTTCCATGTTGCTAGTCAAGCAGGCAGTGAAGTTTCGCAGCCTGAGGTTGTTTCTGCTTTGCGTGATGAGGAAGATGCTTCTATAAAGCCACCT GTGGACAAAGGTTCCACCTTTTCCCACGAGTCTCAGAAACAGGAATTGGATCAGGCTTCTGAGGAGAGTGGGAGTCTGAAGTCCAAGACTCTTGCCAATC CAAATCAAATAACACATGGTGAAGATTTTACTAAGCACCGGGAAGTGGACTCAGTGGCAAGTATACAGTCTCTGAAGTCTAATGTGAAGCAAATGATTCC AGATGTAGATTTGAACAAACAGACTGATCATCGTAATTCATTCACTTCAGGCGAACAACAGACGAACACTGGTCATAAGACTAAACCACTAGGAAGTAGC ACTGGTTCTTCTTCATTTAACAGTAATTCTGCTGCTCGTGGTTTTTCAAGTTATGTGAATTCACAAGGAACTACTGAAGTGACTAAGGTGCAGCATGATA CAGATAGTTCAAGGGACACAGAGAGAGCTTCTCATCTATTTCCTGGTACTACACAAATTCACAATGCAATTGACTCACACAGAACTTCTCATCTCTTTCC TGGTACCACAAATGTTCGCGATGCAAATGACACACAGAGAACATCTCATCCATTTTCTGGTACTACAAATGTTCACACTGCAAATGTTTTTGGAAGTGTT GGTGGAAAGTCCATTCTTTCACACAATGCGAGTGGTGTATCTCCTGCCATCAATTCTGCCACCAGGCCTGTTCAGAGAGGGGGACAACTAAATCCTACAG GAGCAGTAAATACACAACCAGTCTCAGTTACTAGCTCACCTTTGTCATCAGATGCAAATAGTACAGCTGGAAAGTCGTCTATTCGAAAGTTTCATCCTTC TAATGAGCAACATGGAGCTTCATCCAAGCTTGGGATATCAAGTTCTGATTTGTCAAAACAATTTGTCAATATTAATGAGATGACCAACGAATTGGATCTA CTTTTGAGGTCAATAGAAGAGGCTGGTGGTTTTAGAGATGCTTGTACCAGGTCACTACGAAGTTCAATGGAGGCAGTGGAGCAAGGCATGGACGCTCTAT CTAAAAATTGCAAAATACAGGCGTGCCAAGTGGATGAGCATCTTAAGGAGGTTCAATATCTTCTTAATAAGACAATACAAGTTGTAGCAAGAAAGATATA CATGGAAGGTATATATATTCAAGCTTCTGATAGTCAATATTGGGACCTATGGAATCGACAAAAGTTGAATTCGGAGCTGGAGCTTAAGCGACAACATATA TTGAGTTTGAACCAGGATTTGACCTACCAGTTAATTGAATTGGAGAGGCATTTCAATGCTCTTGAACTGAATAAATTCAGTCAAAATGCTGGCAATCGTA CTGGTCATGGTGCTTTTCGAAGTAGATATGGACCTTCAAAAAATATTCAGTCATTGCATAGTTTGCATAATGCAATTAGCTCACAACTTGTAGCTGCAGA GAATCTCTCTGAATGCCTTTCAAAACAAATGTCATCTTTGAGTTTACGGTCTCTATCTGAGAAACAAAAGAATGTGAAGGAGCTATTTGAAACAATTGGA ATTCCCTATGATGCTTCTTTTGGCACTCCAGACATGAAAGGTTCTATGCGGACTTCTTCTAGTAAGAACCTTCTGTTTTCTGATTTCTCTGCTAACAATG ATAAGTATAAGAAAATTCAAGGCAGTGCTATGAAGAACTGTGAATCAGAAATGGCTAGGAGGAGGAGAGACTCACTTGACCGGAGTTGGACCTGCTTTGA ACCTCCTAAAACCACCATCAAAAGGAAGCTGCTGCAGCAAGAACTCCAGAAACCGAATTGGAATGGATCACCCTTCTCTGTGAATAAAGAAAAAGTCAAA ACTTCTATGCTGAAGGAATCTGCTCCTCGCCAAGCAGATGCGGAATTTCCTTCAATTGTATTCCCTGCTTCTAAAATGAATGTGGGCACTCTGGATTCCC ATTTTGAACATGAAGAGGCATCAGAGCGCTCAAAGCCGTTTTTATCTGACAACTTCCTAGCACCCACTCAAGTGTCAGAGTCCAAGTCCCATGTTTCACA AAGAAGCAATATTTCTGCATTTCCCTCTTGGTCTGCTTCCCAATTGTCACCTGCAATTGTGCATCGTCATCCCACTGAAGCTAAAGATTTTAATGCCGAA AAACTAAATGTTGTTCAAAAGTTAGATTCCACCTCAAACAGTGAGAATAAGTCTGTTCTGCATACAAAAATTCCTCCAAATTCTTCAATCTCTACCTATT CAAACCCAGGAACACCTTCGCCTTTTAAATCCAGTGAAGTGCCCATAAAAAATAGCAAGATGACTATGGCTACAAGTTCCACGGTGGGTAACATACTCCC AAATGTATTTACTCCTGAATCTTCGAGAAAACATGACTTTCTGACTTCCACTATTTCTTCGCCGTCAACCTTGTTTGGAAAAACTGAGCTAGTTGTTGAT AGAAGTCAGCCCAAAGCAAATATTTCAGCACATCCCACATTTGGTGGTTTGTTTGATTCTCCATCATTTCCTACAATTAAAACATCATCGGCTGCCTCTC CATTGTCGTCATCTGTCTCATCTGCAACACTGCCTTCAACAGCAGTTTCTGTGGCATTAAGCAGAGGTATGACTAGTTCAAACCCCAGTATAGATTTAAC TTCAGAGACACTTAAATCAGAGATTCAACCAGCTGCTGTGTCTAATTTAAAGACCGATCTTGGTGCTGCTTCAGAAGTGGTCACTCAGCCAAATGAACCT CTTAATGGTAAAGCTGAATTGAAGCTTGGATCTTCAGGAAAATCAAGTCCTAAAGATGAAAAGTCTTCCAACAATACAACAACTTCTGCGCTCAATGTTG TCAGAGACTCTCAATCAGAAAAACCTTCTGAAGCACCAATGCAGTTTTCAAATTCTTTTCTTGCTCCTGCTAGTGTTTCAAGCGGGAAAAATGGGGGTCT GGATTTTGGAATCCCAGATCAGGATGAGATGGAGGAAGAAGCTCCTGAAACAAGTAACACAACTGAACTTAATTTGGGAAGCCTTGGCAGGTTTGGGATT GGCTCAACCCCGAATCCATCTTTGCCTAAATCAAATCCATTTGGGGGTTCATTTAGTAATGTAGCAACTAGTTCATCAAGCCCTACAATTTCATTCTCAG TTCCTGGTGGAGAGTTGTTTCGTCCAGCTTCTTTTAGCTTCCCAAGCTCCCAGCCATCTGCACCAGCCCAGTCAACAAATTCAGGTGCATTTTCTGGTGG CTTTGGTGCTGGGGCAACTGTTCCTGCATCAAATCCTCCAAGCGCGTTTGGGAAGCCGGCACAAATTGGATCAGGGCAACAGGTTCTTGGATCAGTTCTT GGTTCTTTTGGACAATCAAGACAGCTTGGTAGTGGTCTACCTGGAAGCGGGTTTGCAGCTCCCAGTGGTTTTGGTGGTGGATTTGCTGGCAGTGGTTCTC CTAGTGGTTTTCCAAGTGCTGCTACTGGTGGAGGTTTTGCTGGTATAGCATCAACGGGTGGAGGTTTTGCTGGCATAGCTTCAGCAGGTGGAGGCTTTGC TGCTGCTGCTGCCTCCGCATCCACTGGAAGTGGTTTTGCTGGAATCTCTTCAGCAGGTGGAGGATTTGGTGGTGCTGCTCCCACTGCTGGTGGTTTTGGT GCTCTTTCTTCAGGTGGTGGTGGGTTTGCAGGAGCTGCTTCAGGTGGTGGTGGTGGGTTTGCAGGAGCTGCTTCAGGTGGTGGTGGTGGTGGTTTTGGGG CATTTGGCAGCCAACAAGGAAATGGTGGTTTTTCTGCTTTTGGTGCAACTGGAGGTAGTAAACCACCTGAGTTGTTCACACAGATGAGAAAGTAGTATAT TACATTTTGCATTTGTAAGTTAGTGAAAATGGTTTGAAAGCCAAGTTTTTATTTGGTGCTATACAAAGAAATTACATTGCACTACTGAGCACAATATCTT GCAGAAAAGAAAACAGTACAAATTTCAAATGTAGTATTTTCTTTACTGTTAGCAGCTCCATATTTTTACTTTTCTCTAGTTAACAAATGAAATTTGTACT CATGGTTATTATGTTGTGTGTTCTGCTTTGAAGTTTATATTATCAAAATGATATAAATATAAGAACGTTGTTTGTGAACAGGAAAACAATTTACAAATTT GAAGTTTCAACTTCAACTATTCATATCATTGTAATATTTCATTATTAACTATTATAAAACTCTAAAC
• Tissue: flowers
• Gene name: LI_gene_15937;
• Additional information: details;

Expression of Ll_transcript_271108

FPKM

• FPAB: 4.6
• FPNAB: 6
• LF1: 5.8
• LF2: 5.3
• LF3: 5.9
• LF4: 4.7
• UF1: 4.3
• UF2: 5.5
• UF3: 5.8
• UF4: 4.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_271108

• Blastp: Nuclear pore complex protein NUP214 from Arabidopsis with 41.84% of identity
• Blastx: Nuclear pore complex protein NUP214 from Arabidopsis with 46.68% of identity
• Eggnog: NA(ENOG411262D)
• Kegg: Link to kegg annotations (AT1G55540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461878.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;