| Id Trinity | FTRINITY_DN47946_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_161609 |
| Sequence | GACATTGACTTTTGATCTTCTCATACGTATGTATATAACTATAATGTTTTTCCATAAAGAACTCACCATATTTGTTTGAAGGAATTTGGATGTAAAGAAA AGAATAAGATTCAGAAATATCATAAATGGGTTTCCAACTTCTTCTTACAATCTTCACCAAATCACTCACCTTTCTTACATGGTAACACTCAACTCTTTAT TTTTCTTACCACTTTCTTCAACTTCAACTTCAACTTTTTCCCTCCTATTTAATTCTGTTATTTTTTATTTTGACAAATGCAGGCCCCCACTGAGTTTGAT TTGTCCAGTGTACGCTTCTATTCGTGCAATGAAGAGTGATTCTCGCTTCAGCAATCAGCAATGTCTTGCTTTTTGGGTTTTGTTTTCATTCTCTATGATT ATGGAACGGGAATTTGCAGTGCTATTTAGCAGGTAAAGGTTTTGTTTTTATGTATTTTAACTGGTGATTTGAGTTCATGAACAGTGTATAATTGAACATG AAATGCATGTTAATTACTGCCTTATGTTTTGTTGCTGTTTTCATCTTCTAACTTAATATTAGTACTAAAAACTCATTTAACATGAGATTTTATGGACTTC ACTTTAGGGATAAAATCATTGTAGAGAGTCCCTTGAAAATTGTAGCTAGGAATGATGTGAAGAGTTTTAGTCAGAATTTGTGTTGCTAAAAATGCAATGT TAAAAGGAAATAAAGAAGATTTTGTCCCAAGGGGAAGCAGGGTTAGGAAAGAAAGAAAAAAGTAGTCTACTAAACTTCGAAGTTCATATAGCTCTTCCTC CGCATATCGTCAATGTGTACTGCTCGGAAAAAGGCCATCCTAGTGTTTTAAATTGTGATTGTGATTATGTTGCATTGACTGTAATTGTGAAGCGAGAAAA TACGGCCACAATGAGTTGGGTAGACTTCTGAAACTGCAATATGAGTACAATTTAAAACAGTGGGTCATCTCTTCTGCTTATCTGTGAAAGTCCTCATTAT TTTAGTATTCTGCTACTGTTTCTCTTTAGTACTTGGTTGTTATTACAGGCTACCATGGTGGCCTAATGTGAAAAGCATGGCAACTATCTTACTGTTGATA CCTTACTTTGGCGGTTCTCTGCACATCTATAAGTACTTGATTAAGCACTACTGTACTTGGAACATATGTACAAAGAACTTGAACATCGTTAAGCAAAAGA GCACAGATGTTGTATTCGATGAGGACAGCAAACGCGTTCGTGTCACTGAACAGACAATTATTCCAAGTCAAATACAAGAGAAGAAATTTGCAGTAAATCA GGGGAGATATGAAGTTGCTATCAATTATAAGAAGCCAACATTTATAAAGCAAGTTCAGAAAGAATGGAGTTGTGCTTTATGTCAGATTAGTACTACCAGC GAAAATTGCTTACTGGCACATCTTCAAGGTAAGAAACACAAGACTAAGGAAAGTGAAGTTAGAAATATGCTACATTTAATGGATAGCAAATACTCAGCAT CCTCTAAAGGAATAGTTCTACTAAGGAATCTCAACCAAATTGCAAAAATTCTGAATCCAGTTTCTAGATCCATAAGATTATGTGAATGGATAAAACCAAA CTTTGGATGGATGAAATTGAACACCGATGGTTCTATAAACAATGAAATTGCTAGTTTTGGTGGTCTGCTTCGGGATCACATGGGTGAACCGATATGTGCT TATGTCTCTAAAGCTCCCCAAGGAGATGTTTTCTTGGTTGAACTTTGGGCCATATGGAGGGGCCTTGTTCTTTCCTTGAGTCTTGGGATTACTGCATTAT GGGTGGAGTCGGACTCCATGAGTGTTGTGAAGACAATCAATAAAGAACAACCTTCTTGCCCAAAAGCTTATGGTTGCTTGGAACAAATCTGGAAACTCTT GACGAAGTTTGATAAATATCACATTTCTCACTCATGGCGCGAAACTAATAGAGCGGCAGATCATCTTGCAAAGATGGTTCTTTGTGGAAATGATGTTATT TTGTGGCCAGTTGATTTTCCACATAGTCTTCGCATTATTATCGACGACGATTCAAAAGGAAAGAAATATATTAGAAGGTGATTTTTTAGTCTATGGTTGA TTCTGGTTTCTATTGGATTACCGAGTGAACTACGAAAAGAAACAATAGGAAACTTAAAAACTGTATGTTATAGCTTATGCAAAGCCACTCTAGAGGTCAA TTGGCATAACACATTTGTAGACATGACACTCAGTTGAAGATCAATGTAAAGCTTATTGCTTTAGCAAAGCTTAACTTTTAAACCATTTTAAGTTGACCTT ATTGAATGGACAGAGTTACTATTCTTTTGATAGATAAAAATGTATGGAACTAAAAGTTACCACATTTTTGTGGTATCAACATAAGCAAACATGACC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_16434; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_161609
| Blastp | Putative ribonuclease H protein At1g65750 from Arabidopsis with 26.9% of identity |
|---|---|
| Blastx | Putative ribonuclease H protein At1g65750 from Arabidopsis with 26.9% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019459325.1) |
| Pfam | Zinc-finger of C2H2 type (PF12874.6) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |