| Id Trinity | FTRINITY_DN48026_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_55599 |
| Sequence | TTATTAACCCGTAATGTAATGAGCATACATTATTTTCTCTTATTGTAAGATAAGTTATAAACATCGAGGTTGGTGGGGCTGCGTCCTTGTTGTGTTGCAT ATAAAAGAAGCAGGCAACAACATAAGAGAGCGCAAGTTAAAAGAGAATCTGTAAGAGAGATTTAGAATGGCGAATTTGCCTCAATCGTTGTCAATGAATG CTGCTTTTGGTGTTGGTTCTGGTCTCAGCGGTGCTTCATCTCCGCCTCCTCCCCACGGCGGCTCCGCCGGTGCTGTCAATCAGGGCAATAAGGATCGCAA GATGGCTTCAGCGGAGCAGCTTGTCCTCGAGCTTAGCAACCCTGACCTCCGCGAAAACGCTCTTCTCGAACTCTCCAAGAAGCGAGAGCTCTTTCAAGAC CTTGCTCCACTCTTATGGAACTCCTTTGGTACCATTGCTGCACTTTTGCAGGAAATCGTTTCTGTATACCCTGTTCTCTCGCCACCAAATCTTACTCCAG CGCAGTCAAATCGAGTGTGCAATGCTCTGGCACTTCTTCAGTGTGTAGCATCCCACCCTGAAACAAGGATGTTATTCCTCAATGGTAATGTTTGTTCATC TGATGGACTTTGAACTTCTGTCTGCTACTGTACATACCATCTTTGCGTTATATTATATATTCTGATAGTGACAGAACTAACACATTCTCAGTTAGTATGA GCACTGGGAGATTCTGTTAGCTTCTTTTCAATTGGTATGCCATATGGATATTATGATGAATTGGACATAGAACTCCTGAAACAGTAGGTTAAAGATGAGC ATGGTAGGACATAACACAAGCCAAGTTGATGAACCTAATAATAGAACATCACAATTCTCGTCATGGTTTTTCTCGTAAGAGGAGTACATGAAGTGTTTGA TATTCATATAATATAATGAATCTGTTGCACATGCCCTTTTTTCTGCAGCTCACATACCTCTATATCTGTATCCCTTCTTAAATACAACAAGCAAGTCTAG ACCATTTGAGTACTTGAGGCTCACCAGTCTTGGTGTCATCGGTGCCTTAGTGAAGGTCGATGATACTGAAGTTATAAGTTTCCTCCTTTCAACAGAGATA ATTCCTCTGTGTCTGCGCACAATGGAAATGGGGAGTGAACTTTCAAAAACTGTGAGTTTAATGATTCTTGATTTTTTAGTCTTGGGCAAACTAATTCAAG CAGCGTATTTGTCTAATGATTGGCCGTAGTTGCCATTTACTTTAATATTTTATTTACTTTATATTTTTTTCAGCTACATTCTTGATTCTTGCTTGTTTTA GTTATGTGCTGCACATACTCATGATATATCTGCTAATGCATTTATATTACACACTCTGAAGCCTTTGTTTGAGAAGACTGCTTCTATGTTTATTGTTTTG CCTTTTGAAAAGTTGGCCTTAATTTAACCTTTTAGTTGTAGTCATGATACTGTTTGAACTTTCCCTGGCATGTTTATTTTTATGAACATGTACTTAGAGC ACTGGCATCTTTGTGCTATATGGATTGAGATACAATTCTTGTCCGTTGAGCTAAATCTTTGGTATAGATTCATACTTATGTGTGGTTAATGTGGAAAATA TAATTCTTCAGGAACACCGAGGCACTTGATCGTTTTAAGTTGTCACATTTTTCTTAACTATTTATATCAAATAGTAGTAAAGTGGAGCACCGTTGTCTAA TGAAAGCTCTACAACATCAGGTTGCAACTTTCATTGTCCAAAAAATTCTGTTGGACGATGTGGGCTTGGATTACATTTGTACTACGGCAGAGCGCTTTTT TGCAGTAGGTCGTGTTTTAGGCAACATGGTGGCAGCTCTTGCTGAGCAACCCTCATCTCGTCTGCTGAAACATATCATTCGATGCTATTTGCGACTGTCA GAGAATCCAAGGGCTTGTGATGCATTAAGAAGTTGTCTTCCAGACATGTTACGAGATGCTACTTTCAACAGTTGTCTTCGTGAAGACCAAACTACTACGA GATGGCTACAACAATTGCTTCTCAATGTTGCTGCGAATCGGGCTCCGCCGATGCAAGCTGGAGGAGGTTTTGATCATTTGATGTGATCTGAGTAAAGACT ACAGGGTCTTGCTTCAATGCTGGGCATGCTCTGTGACAGTATAATAGAATAGTGGACTTAAAACTCTTGGGATTTGCTGAATCTTTGGTCCAATGTTGTC CTGGGTTGATTTGCTTCAGTATTTAAATTATTAGTGTGTGGTTGCTGTGCTGGCAGTCCTGGGTTGATTTGCTTAATGTTATGGATGAAAGTAACAATCA GCCTCTTACATAGGGTGCTGAGGTAATGAATGGAATAATTTTACCCCCTTAATCAGATTTTCGGTCTCATGCTCTCACCTCTTATATAGGTGTTGAGGTA GTGAATGGAGGGAACTTTCCCCATGCTTCCGAAGGATCATATTTTCTGTCTCACAAAGCATGTCGCCTTATGTGTTACTTGCTGTGAACTGTGATTGATT GAAAAATTAATAAATTTAAGTTTAAAGTTTAATAATTAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_16529; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_55599
| Blastp | CCR4-NOT transcription complex subunit 9 from Silurana with 60.66% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 9 from Silurana with 73.91% of identity |
| Eggnog | cell differentiation protein Rcd1(COG5209) |
| Kegg | Link to kegg annotations (394620) |
| CantataDB | Link to cantataDB annotations (CNT0002055) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440690.1) |
| Pfam | Cell differentiation family, Rcd1-like (PF04078.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |