| Id Trinity | FTRINITY_DN48842_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_4834 |
| Sequence | CTCTTGAATCTCAATTACTATATTACACTTCTTCTTTGTTTCTGATTATTAGGGTTTCACACAATCTCCAATCACAATGGGTAAAGCTAAAAAAAGTCCC AAATTTGCAGTCATGAAAAAGGTTATCACCTCCAAAGCTATCAAAAGCTACAAAGAAGATATTTTGAACCCAAATAAGAAGGACCTTCTGAAGGAAAAGC TACCCAGAAACGTGCCAAGTCAGTCTTCTGCACTTTTCTTTCAATACAACACTGCTTTGGGACCCCCTTATCATGTTTTGGTGGATACTAACTTCATCAA TTTCTCTATTCAGAATAAATTGGATCTGGAGAAAGGAATGATGGACTGCTTGTACGCAAAGTGTACCCCTTGTATCACGGATTGTGTGATGGCAGAATTA GAGAAGTTAGGCCAGAAATATCGTGTAGCTCTAAGGATTGCAAAGGATCCTCGATTTGAGAGAATACTCTGCACTCATAAAGGGACTTACGCTGATGACT GCCTTGTTGAGAGAGTTACCCAGCATAAGTGCTATATTGTTGCAACATGTGATCGAGACTTGAAGAGAAGGATTCGGAAGATTCCGGGTGTGCCAATAAT GTATATCACCAAACATAGGTACTCAATCGAGCGCTTGCCTGAGGCAACAATGGGTGGAGGTAAACTCTCTGGCATTATATAGTAATATTTATTTGCTATT AAAGTTTATTGAATTGAATACCTATGAAACATATTTATAGCTAGCCACTAATTTAGAATTTGAGCTTAGTTTTGTACTTGGTTGGACAAATTAAACCCTC TATATCTCCCTTGATAAACAAGATAAGTAAGTTTCATTAGGTTAGGCTCATACTCTCCGGAGCCATTTTCTTACAAGATATAGCATTCTACACGACATTA GTTTGTTATTGTACATAACCCTGGTCAATATGATCCTCCTTTTCGGGGGTGCTTGGAAGGGCTGATAGAGAGATTAATTGAGCTTATGGAAACTTCTTAT GATGATAGCTTATGCTTATTTTAGAAAAGGACTTATTGAATAACCCCTTAGTGATAGGCAAAATTCCTAGGCTATCACATTTATAATGGCAAAATTTCAG TCGATTTTAGTCTAATGTCAATTTTATATTTGCTCGTTGGTTCTTGCGCTAGTCCGTTCAGTTTATTGACCTTCCTAAGTGAAATGTTAATGTTTTAGTA GTTAATAATCAAGTGTCTCATTACCTGGTCATGACTTGAAATGAATCATTCATCTTAAGCAAGCATTTTCCGAAACATACTCTTATATCCAAACCTTACC ATTGGCTTCAACTATTTTCTTCATATGTTATTGTTGTTGTTGGAACACTAGTGAGTCCTGACACATGTGGTTTCTTAATGTAGCACCAAGAATTTGATGG AGACATTAAAACTGGTGAAGCATTGTATAAGGATGATGTTGACACTAATATTGTAGTTGAGAAATCAAGTCCTGCTACACTACTATGTGTGTTTGCCTAA ACACTTGGCAAGAAGGAACTCTTCAATGGTTGACACCACAATTTTCCCTCATGACTATGTAGTTTTGGCTTTTATCAAATTTTGTTTCCTTATCTTGTGT CACTATTGTATCAAGTTTGAACCTTGGAATTTGACAACCTAAATTAGCATTGCATTTTCATAGTCATATAATTACTTTGCATTTTATTATAACAAAGTTT GCTTTTAAGAATTGTTCTTATGATGATGAAAACATTAATATTTGCAATAATATAGTGAGGCTGTGAACTTATAGATCCCACATTTATAACTACATAAAGC ATAATATAGCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_17639; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_4834
| Blastp | rRNA-processing protein FCF1 homolog from Pongo with 72.16% of identity |
|---|---|
| Blastx | rRNA-processing protein FCF1 homolog from Pongo with 72.16% of identity |
| Eggnog | small subunit (SSU) processome component, homolog(COG1412) |
| Kegg | Link to kegg annotations (100171429) |
| CantataDB | Link to cantataDB annotations (CNT0001523) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433623.1) |
| Pfam | Fcf1 (PF04900.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |