Id Trinity | FTRINITY_DN48884_c0_g2_i4 |
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Name Transcript | Ll_transcript_4850 |
Sequence | TATATCTAATAATTTGCTTTTTCAAAAGACTAGGGGATTCCAATCCAAACATTGTAACTATTGTCAAAAAAGGTATGGCCTTATCCTTTTATATGGAATG AGTATTTTAATTTCTTCTATTGAGGTCATTGAGTTTTTGCATCCTGCTGTAATATTGATGGAGAACAACCAAAACTCTTCAACCAGAACTGATAGAAAAA TCATTGAGAGAAATAGAAGAAATAAAATGAAGGCTCTCTCCTCCATGCTCAACTCACTTGTGCCTCAACAAAGCTCAAGGGAGCCTTTTTCACTGCCGGA TCAGCTTCATGAAGCTACAAACTACATAAAGAAGTTACAGATAAACCTGGAGAAATTGAAGGAGAAGAAGAACACTCTACAAGAAATTCAAAGGGCAAAT ATGAGAGGAGGGTCAAAGTTTCCACAAATAGAGATTCAACAAATGGGTTTAGCCTTAGTGGTTAGTTTGATAACTGGGTTGGATTGCCACTTCATGTTCA AAGATTGCATTCGAGTTCTTGGTGAAGAAGGAGCAGATATTGTTAGTGCCAATTATATAGTTTCTGAAGATTCAATTTTGCACACAATACACTGTCAGAT AGAGGAATCTTCCAATGGAGCAAGGATATCTGAGAGACTGAAGACTTTTGTGTATGAATCTTCCAATGGAGCAAGGATATCTGAGAGACTGAAGACTTTT GTGTATGA BLAST |
Tissue | flowers |
Gene name | LI_gene_17704; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_4850
Blastp | Transcription factor bHLH162 from Arabidopsis with 44.75% of identity |
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Blastx | Transcription factor bHLH162 from Arabidopsis with 45.3% of identity |
Eggnog | Helix-loop-helix DNA-binding domain(ENOG41115Q0) |
Kegg | Link to kegg annotations (AT4G20970) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019440247.1) |
Pfam | Helix-loop-helix DNA-binding domain (PF00010.25) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |