Id Trinity | FTRINITY_DN49030_c0_g1_i2 |
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Name Transcript | Ll_transcript_62215 |
Sequence | TGGAAAACTCTCCCTTTGACACTACCACACGAAGGAGCCGCCACTTTCCCTTCTCTCTCACGTTCCCAACCCTTCTATGTTTTAACACTGTTGCTCAACG ATGCAGGTATCTTTTTTTAATTCCAATTCTTTTTTACTTCACAGGCTTCATCTTTCGAAGCTCAATAATCAGATTTCTACAACTACTTCTGTTTTCGGTG TTTATTATAATCACCATTCGTTTAAGGAGTAATTGTTCAATGTGTAAAAATTGAGACTTTTCACTTTAACAGTGTACTTGTATTCAGTGAATGTATCAGA CTCGGAGAGTTAGTTGCATTTTGATATACTTTATGTTGTTTGGTGGTGTACAAAGCAGTGAGTTTATCAAAATTATGAATAGATTAAAGGGTTTTGGAAA TTTTATTTCTTTTCGTGTGCTGTTTGTACATATCAAAGTTTCATTATAAGGGTTTTTTTGGGAATTGTTGTTTGGACATATCATCTTTTGGCTCAGCACA ATTTAAGAGCCTTCGGAGAGCGAGTTTGCTGTTTGAATTTTGAATCATTGGAATCAGCTTCAGGCCTGGCCCCTTTTGGTTTTATTAAAATTATTTCGGT TGTCGTGTTCAGCTGTTGTGACTGATATGGGATAGAATCCCGGTCGATATTATGGCTCCAATTAGGGTTGTAAAGTAAAGGGAAAGAAGTGAATGTTACG GTCGTGCAGTCATGCTGGATAAATAAGCAAATATGCTTTGAAATTGTCAGAAACTCGGGTGATACATCAATCTGTTCTGTATTTTGGATGTTTCTAAATG ACAGGTTTAGTTTTGAATTGCTCGGCAACATTTGCTAGTAAGCTTTTTGCTACCTGGTTGTGCTCTTTCTGGAAAAGGGGTGATGTCAACATTTTCTTTC TTTGGTGAAATTCCATTTCAACGTAGCTGATTTGATATAAGACTTCTTTTTGGTGACTATAATAAATGCATGCTTAAAGTTTTTCATACCTCAGCAATGT GGGTAGTCTCCTAGCTTTATAGCTGATGGTATATTGTCATGTAAATACTAGTTTCAAGATTGAGTTGGGCTGGTGCCTGCTTTTGCATTTTGTTTGAAGC TATGAATATGTTGCGATCGAAGCAGATCAGTGCCCTTTCTAGCAGTGCTAGGAGTTTTTTCCTTAGTGGTTCACGGTGTAATGGAGCGGATGGCAATTCA TGCACTTGTGCCGAGGATGAAACATGCGTGTCAAGAAGACAGGAGAGGAAAAACGAAATTTTAAATGTTCAGAAGCCAGCCTCCATAGTATCCAAAACTA CATCTGGTGTAGAAGGAAACGTGATTTCAGGAAACATAGTAAATAGACCAGCTTCCACCAAGGGTGAGTTAGTTGTTCGATCTGTTTCTGGACAACAAGT CAGGTCTACTCCAAGCCCATCAAGTACATCAGCTTCTGTTACATATGCTTGTGTGGCTGATAGTGTTCAGAACCATGTTGATACATCTCTTAATGCTGAC CAGTTTTTCCGGGCCGGTATTGCTGCTGTCAGTTTTCTTTCTGACTTAGTTAACTATAAGCTTCCTTTATCAGATGGGATGGGAATACTAGGCAACTCTA AAAATTGTGTGGTTGATCCTGCCCGGACCCTACCCAGCATCAGATCTTCAACGGTGAAACAAATTAGAAAGGAGGATTTTATTGCTGTTCATCCAAAACC ACCCATTTCTGCTCAGCCAGGGCCATCAAACCATACTAGTAATTACCATGGTGCAAAGGGAAAAGGTGATAAACCAAATTCATCTAGAGGATATAAACAT GCTGCTTCTTCAGGGTCAGAGAAGTCAGGGGTTACTCCAAACATTCCTGTAAATAATAATGACCGTAGAGCCTTGCCACCGAGAACAAGAACTCAGTCAA ACCGCTCGGTGACAAATTTTGGTTCCTACATACAAAATTCAAATCCACAGGTGTCGGGTTCATTCAAGGAAAGTTTTAATAAACACTCCAGGGATTTGAA AATGCCAGCTGGGATTGCTTTTTCAAACAGGCATTTTTCAAACACAGGGCATGCTGTCGATGTGGTTTCAGATATACTGAGACAGTTAAGGTGGTGTCCT GCTACAGAGAAGGCTCTTTGCAACCTTAATTTTTCATTAGATCCATATCAAGCTAACCAAATCCTCAAGCAACTTCAAGACCATTCAGTTGGTTTAAGCT TTTTTTACTGGTTAAAGCGACAAGCAGGTTTCTTTCATGATGGGCATACTTACACCACCATGGTTGGTATCCTGGGTCGTGCAAAACAGTTTGGTGCAAT TAAAATATTGCTGGAGCAGATGGTCAGTGATGGATGCAAGCCCAATGTTGTAACTTATAATCGTTTGATTCACAGCTATGGCCGTGCGAACTACCTGAAA GAAGCACTGAATGTGTTCAATCAAATGCAGGAGGTAGGATGTGAGCCTGATCGCGTGACTTACTGCACACTCATTGATATTCATGCCAAAGCTGGATATC TTGATATTGCCATGTCTATGTATGAACGGATGCAAGAAGCTGGCCTTTCTCCCGACACATTCACTTACAGCGTGATAATCAACTGCCTTGGAAAATCTGG TAATTTAACTGCTGCCCATAGGCTATTCTGTGAGATGGTTGATCAGGGTTGTGTTCCTAATCTAGTCACCTATAATATCATGATTGCTTTGCAAGCTAAA GCAAGGAACTATGAGACAGCATTGAAACTATATCGCGATATGCAGAATGCAGGATTTGCACCCGACAAAGTCACTTACAGCATAGTAATGGAGGTGCTTG GCCACTGTGGGTATCTTGAGGAAGCAGAAGCAGTTTTTGTTGAGATGAAACGGAAGAATTGGGTGCCGGATGAACCTGTTTATGGTCTTCTAGTAGACCT GTGGGGTAAGGCTGGTAATGTTGAGAAAGCTCGGGAATGGTATCAAGCAATGCTGAGTGCAGGTTTGCGTCCAAATGTACCAACAAGCAATTCTCTTCTC AGTGCATTCCTCAGGGTGCATAGGTTGTCAGATGCATATAATCTTCTTCTAAACATGGTGTCTCTCGGCCTAACCCCGACTTTACAGACTTATACATTGC TCCTCAGTTGTTGTACAGAGGCACAATCATCATATGATATGGGTTTCTGTTGTGAGCTTATGGCAATTACTCGCCATCCTGCACATACATTTTTATTGTC CATGCCATCAGCGGGACCTGATGGTCAAAATGTCCGTGATCATGTAAGCAAATTCTTGGACCTGATGCATTCAGAAGATAGAGAGGGCAAAAGAGGGCTA GTAGATGCCGTGGTGGATTTTCTTCACAAAACTGGACTCAAGGAAGAAGCTGGTTCTGTTTGGGAGGTGGCGGCTCAAAGAAATGTATATCCTGATGCTG TCAAGCAGAAAAGTTCTTGTTACTGGCTTATAAATCTTCATGTTATGTCGGATGGAACGGCTGTAACAGCATTGTCTAGGACACTTGCTTGGTTCCGCAG ACAAATGCTGATATCCGGGATTGGCCCCAGCCGGATCGATATCGTTACTGGATGGGGTCGTAGGAGCAGGGTAACAGGTACTTCTTTAGTGAGACAGTCT GTTCATGAATTGCTGCAAATGTTCAGTTTTCCATTTTTCACTGAAAATGGCAATTCGGGTTGTTTCGTGGGATGCGGCGAGCCTCTTAGTCAATGGTTGC ACCACTCGTACGTGGAGCGAATGCATTTGCTGTAGTTGGTTACCGTAGAACCATTTTCCCTTCACCTTAGAAACAATTTTGCTGTGGGGAATGAGCTTCT ATTGGGATGTTTTATACATTGTATTAATTTTATTTTGCCATGGTGTGTAGTTATCCAAATTAAATAGGTTTAATTTCTATGTTGGGAAAATATTAAACTG AATGCTCAATAGTAGTAATCTTTGTTATGCTTGTGTCACAACACCTCACTGAGAAGTTGATAGGTTTGTGTACAGGTACAAACTATATATGTAAGTATAA ATATATGTGTCTAGCTGTATTCTTATTCAATTTGACTTTGGTTAAAATTTATTGTTGTAACTGTTTGATTGATTATGCATACAAGTTCTGCATTGTTAAT CTTTTCGTTTCCAATAATTGATTAATAACCATGAAGAAACTGTTTAC BLAST |
Tissue | flowers |
Gene name | LI_gene_17922; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_62215
Blastp | Pentatricopeptide repeat-containing protein At1g74750 from Arabidopsis with 64.73% of identity |
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Blastx | Pentatricopeptide repeat-containing protein At1g74750 from Arabidopsis with 64.05% of identity |
Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
Kegg | Link to kegg annotations (AT1G74750) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019435104.1) |
Pfam | PPR repeat (PF01535.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |