Ll_transcript_12842

• Id Trinity: FTRINITY_DN49130_c0_g2_i1
• Name Transcript: Ll_transcript_12842
• Sequence: GTTTCTTACAATTACAATACGTCACGGATTTCTCTCCATCATTCAGAATCTCATTCAAATTCCAAAGTTGACATAAAATTTGTTTGTGGATAAGTTGAAG CAAAATCCGTGACGTATTGTAATTGTAAGGAACCCGTCACTATCAGTAGTTGTTATTCCATTATTCCATTATTAAATCTACCGATTCCTTTATGTTTCGC TTCAATACCAACCAATTTCGCTAAAACCCTAATGGCTTCGTCTTTCACCCTTTCCTCCTCCTCCTTTTCTTCTGCATTTCCTCTCTCCCACTTTCGGGTA TGCAAAAACTTCAAATTGTTTAGTGGATTGCACAGAATAAATTCAACTATTACAAATGGGCATGCGCCGGATTTGGCATCTGTCCGAATGAAATCTAAAT TTGCCTCGAGTGATGGTAGAATTAAAGCTACATTGGCCTCTGGAGGAGACCTACGAGGTATTGAATCGGTTGGAACTGAGGTACAACCTGATGCAATAGC ATTTGCAACACTGGGAGCTGACACGGCACTAGCTAGCAACGCTTTTGCCGATGACAGCGATGAATTTGATTTGGACAGACCTACAGATGGTTTTGCTTCC ATTCCGGAGGCCATCAAAGACGTCCAGAATGGAAAGATGGTAGTGGTGGTAGATGATGAGGACAGAGAAAATGAAGGAGACTTAATAATGGCAGCAGAGT TGGCAACACCTGAGGCAATGGCTTTTATTGTGAGGCATGGAACCGGGATTGTTTGTATAAGCATGAAAGAGGAAGATCTGGAGAGACTGGAACTTCCTTT GATGGTAAACAGTCGGGATAATGATGAGAAACTCCGTACAGCGTTCACTGTGACAGTGGATGCTAAATATGGTACCACAACAGGGGTGTCAGCTCATGAT AGAGCAACAACAGTTTTAGCCCTTGCATCCAAAGATTCAAAGCCAAGTGATTTCAACCGGCCAGGCCATATTTTCCCCTTAAAATACAAGGAAGGTGGTG TCTTGAAGAGAGCCGGACATACAGAAGCTTCTGCTGATCTTGCCATACTTGCTGGTTTGAATCCAGTGGCAGTTCTGTGTGAGATTGTGGATGACGATGG TTCCATGGCTAGATTACCTAAACTTCGCCAGTTTGCAGAGCGTGAAAATTTGAAAATTGTATCCATTGCTGACTTAATAAGGTATAGAAGAAAGAGAGAT AAGCTAGTAGAACGTGCTGGTACTGCACTGATACCAACAATGTGGGGGCCATTCACAGCTAACTGCTATAGGTCACTTATAGATGGGATTGAGCATATTG CAATGGTTAAGGGTATCATTGGAGATGGACAAGATGTTCTTGTGAGGGTACATTCAGAGTGTCTCACAGGAGACATATTTGGATCTGCCAGATGTGACTG TGGGAATCAGCTTGCACTTGCAATGCAACAGATTGAGGCTGCTGGTAGAGGTGTATTGGTATATCTCCGTGGACATGAAGGAAGGGGTATCGGACTGGGC CATAAGCTTCGTGCTTATAACCTACAGGATGACGGACGGGACACCGTAGAAGCCAATGAGGAGTTGGGATTGCCTGTTGACTCAAGGGAGTATGGAATTG GTGCACAGATATTAAGGGACTTAGGTGTTCGATCTATGAAGCTGATGACAAACAATCCGACAAAATATATTGGGCTCAAAGGTTATGGGTTGACAATTTC TGGTAGGATCCCATTGGTAACACTTATCACCAAGGAGAATGAGAGATACCTGGAGACCAAACGTGTCAAAATGGGTCACATGTATGGCTTGGAATTTAAC AACCAACTGAGCTATGATGACAGTGGAAATGGTAAAGCAAGTAGTGGTGATGATTCTAATGCAGTTACTGGCATATAAACTTGCCTTTTTCCCACCAGAT ACTCAATTTTATGTCACAGAAAAGAGGAAGGGAAATGCAGATTTCGATACTGCAAATGGATATAAGAAGAGAAAAAATCGTGATCCTACACACAATTTAA ATTTTCTAATTCATATGCCTTATTTTTCTTCAGGCGCTCTGCTAAATTAGGCTTTCTCAAACATTTTTTCTTGCTCTGAAACTTTATCTAGTACTCCTTA TCAAATATAAGCAAATTTTGAGTATTTCAATGTTGTCGAATATAAGGACTATGTAGTTTTGTGCTAAAATTTTCTAGTTACACTTTTATTTTATTTTAAT GTTTAGTCCTTTTGGTTTTCAAGTGACTTTTCTCATGTAATAATTGCGCAATAGATATTAACGGCAGATAATTTAGTAATTGAATACTTTTTTTTTAGAA TTGAATGATTTTATTAAAGGTTTTCAAGTGACTTTTCTCATGTAATAATTGTGCAATTGATGTTAAAGACAGATAATGTAGTAATTGAATACTTTTTTTT AGAATTGGATGTTTTTATTAAAGGATGTACATTGCCATTCCGTTTATATACAAAAAGGGAG
• Tissue: flowers
• Gene name: LI_gene_18068;
• Additional information: details;

Expression of Ll_transcript_12842

FPKM

• FPAB: 27.7
• FPNAB: 25.7
• LF1: 51.4
• LF2: 62.4
• LF3: 56.5
• LF4: 50.9
• UF1: 47.8
• UF2: 59.7
• UF3: 58.3
• UF4: 48.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_12842

• Blastp: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 73.92% of identity
• Blastx: Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic from Arabidopsis with 73.35% of identity
• Eggnog: Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (By similarity)(COG0108)
• Kegg: Link to kegg annotations (AT5G64300)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019445549.1)
• Pfam: 3,4-dihydroxy-2-butanone 4-phosphate synthase (PF00926.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;