| Id Trinity | FTRINITY_DN49163_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_12763 |
| Sequence | CTTTGATGTTTTAAGATTTAACAATGTGTTGCACCACTAAACAAATACTTTGTGGATTATTGTCACTGCAATTTACCCTAATATTCATTGCTAATGACTC AATATTACCAATTGAATATCCTTCCCGATTGTAATATCACCGGAGAATTTTAGGTGAAGCATATGACACGGTTGGCTTCTCTCTCTCCCCTAATGCCAAA GATGTGGCGCACATTAGACACCACCACCACCCAACTAACCCTCACCGTCAGAGCCTTGCGCCTCCGTTCCCACCACCTCTTCTCTTCATCTTCTTCATCC ACTCACCCCAAATTCTCCCACTCTTCTTATTCTCCTTCATCATTCCGTACAATCGTTACTCTCACACACTCTCACTCTTTTCTTTCATCCGCTCCTAAAA ACACACGGTATCATGATTTTGGGTCTAAATTCGTTTTCTCTGTTAAACGGTGCGTTTCGTCTTCTTTTTCTTCGTCTCCTTCGTTAGACTGGAACGACGC CGTTTCGTGCTCTGAGGTTGATGATGGCATTGACGATGTTGGTGGTGATGACCATGATGTAAAGCCTTCTTCTATTCCTGTTAGAGCGTTCTTTTTCTCT ACAAGTGTTGATTTGAAAAGCTTAGTGGAACAGAACAAACCAAACTTTGTCACACCATCATCACGAATGACTAATTATGTAGTTCTCAGGTTTGGCAATC TTTCTGATTCCAGGGTATGTCTCTCTTGGGCTATGTTCTTGTTTTCCCTTATCTGTTATTTACTCATGTTCTGCCCTATCTTATTTTATTTTATTTCGTG GACATGTTATTGAACATATCTTATTTAGGCAGTTGCATTTCCATAGGTTGAGGAATGAGTGATTTTACCACTTTGTCCTTTTCATGTATCTTTATCATGA GTTCTTCATCAAAATAGAAGAAGTTAAAGAGGACATAAAGTATAAGGTTTCTTGTTGACAGTGGACATACATGAATGCATATCAATCCATCTGTTTTGCT GTGATTTTTATATGGAAGAAACATATATAATATAGAATTTTTGCAACCTAATATAAGTATTGGTTAAGATTTTTTAGTTTTCTTTCTTAGTTAAATTTTT CTTGTATATAAAAAGCACCATGAAATCAAATTAGTGTCCGAGGCATATAATTTAGTATAGATATAGATTTGTGAATCCTTTTAGGATGAAGTTTAGAAAA AAGTTGATGCATGAGAAATCGTTCATCCTCTTCACATATTGCTGTTTGCAGAAGATGCAGTGCCCGTGTGTGATTACTGATAATATAAAGTTATAAACAC GTTTACAATGTACTGAATTAAATTGGTTGTAGCCTTGGTCCCTTGGACCTGGTTTATCATGCCCATGCTTTTTATGGATGGGGATATTCAGTTCATGCAA CTAAAGGATTGAGGAAGGGAAATATATATACACTCATATAGTCTTCAGGTTGGGATTGAAAAAACTATAAATAGAATTTGTAGGATTCATTTTGCTTGGT TTGGCTACTTATAAAATGTGGGTTTTATTAGCTACAAACACTGAATTGAGTTCTATGAGGTGTTGAATTTAGTTTCTTCGCATAGAGTAAGAACTTGGAG CTTTTAAATTGACAGTGCGTAAGATTTAGATGGCTACTAGTTCAACATCTACACTGAGCGTTTAATGATCGCTCAGTCCTCTTTAGAAAATAATTGTTGG ATAAAAGACATAAAATAATATAATCTTACTCGTTGGAATAACTTGTATGTAACCTGTGTTGGAGATCTGAATTCCAACTACAACAACAATAGTAATAGTA CAATTACAAATAATAAAATAAAAAATCTAGACTATAATTTTGAGGATCTGTGTTTTAAATTTTCAAAAACACAATTTCGTCAATAAAGTCAAGTAACATC ATTTCAAATTTATAAACAACTTTGCAAACTAACTAACTATTTCTTCTTTCATTTGCTTTTTCATCATCCATCCTATTATATAAGTGTTGCTTTACTTCTG TAAGAACTATTACTATGGAACCCCTTTAACAATGCATGAACTGGATGATCAAGTTTATTCTTTGTCTTTGTCAGTTTTTTAAATTTGAATTCATAAAACC AGCGACAGTAACTGCTAACTACTTTTTCTTTCAGGGTCTGGGTACCGCTTTCTTGAGTGGAAACAGTGGCTGTTATATGGTGGTTTTTCAGTATGGCTCT ATTGTATTGTTTAATGTCCCTGAGCATGAGGTTGATAGCTATTTGAAAATTGTTAAAACGCACGCATCTGGTTTGCTTCCTGAAATGAGAAAGGATGAGT ACGAGGTTAGAGAAAAACAAGCATTAAGCACGTGGATGCAAGGTGGGCTAGATTACATAATGTTACAATACTTGAATATTGATGGAATTCGTACTATTGG TAGCGTTCTGGGTCAAAGTATTGCTCTTGATTACTACGGACGGCAGGTCGACGGAATGGTTGCAGAATTTACTGACATAAACCGTGAGATGGAAGCAACT GGAAAATTCAAAATGCAAAGGAAAAAGCTTTTCCAGTTGGTGGGCAAGGCAAATTCAAATCTTGCTGATGTGATTCTTAAGCTTGGACTATTTGAGAGAT CAGATATTGCTTGGAAAGATGCAAAATATGCTCAGATATGGGAATATCTCCGGGACGAATTTGAATTAACACAGAGATTTGCAAGTCTTGATTTTAAGTT AAAATTTGTGGAGCATAATATCCGCTTTCTTCAAGAAATTCTTCAAAACAGGAAATCAGATTTCTTAGAGTGGCTCATTATTGCATTGATTGGTGCTGAA ATTCTTCTGTCTCTTTATGACATAATCCACCGTGGTGCAATGCAACTTTAGCAAAATTTCTGTTTTGTGGCACATAAGACCAACATTCTTCTGAAGGGCA AATGGGTAGCCAAGTAAAGGTCTTTTGCAGCTTATTTTGGTTGTGGTTGTGATTGAGACAGCTTAGTATCTTCATAAAATTGGATGTGAAAAATCTAAGA ATTAGTTGTTTGAGGAACATTTTATGTGACGTTTATCTTCGAAATTTACCCCAATTTTATCTTGAAGGAAGAATAGAATATTAAACATTTTTCATAACAA AATGATCACAAATGTAACTAAAGTAGAAACAGATGGAGTGCATTTTATTAAAGATGATTTAAGTGTGTAATTGACATTTCGACATATTTCCTCTTTTTGT GTGGATATAATCTATTTAATTGATTAGAAAAAATAATAATGAAGAGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_18116; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_12763
| Blastp | Sporulation protein RMD1 from Saccharomyces with 21.94% of identity |
|---|---|
| Blastx | - |
| Eggnog | - |
| Kegg | Link to kegg annotations (YDL001W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462187.1) |
| Pfam | Uncharacterised ACR, YagE family COG1723 (PF02582.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |