Id Trinity | FTRINITY_DN49175_c0_g1_i1 |
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Name Transcript | Ll_transcript_13072 |
Sequence | GAAAAAGAAAGTAGGAAAGAGAGAAAAAAGCGGTTGACGGCGCGTGGTTACGGTTATTTATAACTGCCATAACCTCTCCTCCCTCCAAAACAAATTCTTG ATTTCAAACGGAACAGTTCCGAAAAACCAAACCCTAAGCCTCACCCATTTCACAAATTCAATGCCTGTTGATTATGCTCAAATAATCTCTATCTTTTATT AAACCATGGCTTGAATCCTTGTTATTTTTTCGTTACGGAATTAATTTCATTTCGTAGATAGTTATGGTTATGGGTGAGAGTCGGTTGATTGTGGAGGAGG ATTTCGTAATTACATCTGAAGAGATGTTTTCTCCTCCACGATCACCGAAACCATTATTGATGAAGATCAATAGCATTGTTTCTATGAAGAGTAGTAAAAG CTATAATAGGCTTCCTTCTCAACCCTTAACCCTATCGATCCTCAAATTAGATGCCTCTTTTTTCCATGTTGAAGTTTCGAAGAATGCAAGCGTTGGAGAG CTCAAACATGCTGTGGAGGCCATTTTTAGTCACATGCCTCAGAAAATATCATGGCCACTTGTTTGGGGGCAATTTTGCTTATGTTATGAGGGACATAGAC TAGTTGTAGAAACAGATTATCTTAGAGATTATGGTATCCACGACGGTGACCAGCTTCGTTTCATACGTCATATTTCCAACATTAGCAGTTCTCGAAGAAA ACGGTCGAAGAAACGAGTTGCGAATTTGAAACAACATAGAAGGTCAACATCTCCATTGAATGAATACCAACAGATAGAACATAGTGATGAGGATGATATA GACATAGAGAACGGGAAGATCCAGCATTGCAATGAAGAAGAAGAATCCATTGGGAGCAACAGATTAACAAAAAGCTTATTTGGAGGGTTATTGCCATACA GCCAGGTGGTAGATGTTAGAAGAGCTAGATTTGAAAGAAGGAATTGTCCCTCGTTGATTGCCAGAGGTATATTGGAAAGTATTAGTAACATTAGAAAGGT GTTATGCACTGGCAAGAGGTGGCATTATTCTCCCAAAGATACATGGAGAGAGTATTGATAGACTGTTCATTAAAATGATTTTATTCTCTTCTGTCAATAA AATTTTCAACCATTCTTTGATTCTTTTAAGGAAAATTCTTTCCTGTACATCAAAATGGGATATCAATTGATGCCAAAAAAGTTGTTCGGGTAACATTTAA GTGACTTTTCTTTTGGGTGGTTAGAGTTAGACACAGTTTGCCATGTTCAAAAGCTAGGCACGAGTATTACCAATGGAGCAGTAGCTTGATGGATTTTGTC ATGCATGTGAATCATGGAGTCCTTGTTCATTTCCAACTGGTCAGACTTCAGCCTATTTTTTTTGTGCTCCGGGTTTGTTGCTGAAATCTGTGAAGCTTTT GAAGGATTAAAGTTAGCAATGACTCTGGGTTTCCACCATACTTTACTAGGATTCAATTGGAGTGGTGAAATGTGTAATGGGAGGCTACATGGGGTGTAGT TTTAAGGACCTTAGAATTCTGCAGGAAATCAAAAAGCTGTTAGATGATTAGTGTGAAGTTAAAGTTGCCTATATCTGTAGGGAGGGCTAATAAAAGTGCT GATGCATTAGCTACTCTAGATTGTGGTGTGGGCAACAAACTGACTTAGCAAAAAAATCTAGGCATGGGAATTATATTGCTATTGTTTCTTGTATGTTCCT GTGCAAAGCGATGTAGTTAATCTTGCACTTGAAATCGAGACTACAAATTATTAATGTTAATTTTTTATTTTTTATTATATGCTCTACATTGTTGTGGTTA TATTAATTTATACGAAATATCATTGTTCAAAGAGAATGAGAGTAGTGAGTGAAAGAAAGTAAAATGGAAAATAGAAATATTGGGCCTATTTGAAATGAGG CAGTGAATGTTGGGTTAGGAAGTAGGCCTAGCCCAAATTGAAATGAAAAAAC BLAST |
Tissue | flowers |
Gene name | LI_gene_18138; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_13072
Blastp | U11/U12 small nuclear ribonucleoprotein 25 kDa protein from Mus with 31.03% of identity |
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Blastx | U11/U12 small nuclear ribonucleoprotein 25 kDa protein from Mus with 31.53% of identity |
Eggnog | u11 U12 small nuclear ribonucleoprotein 25 kDa(ENOG4111HGM) |
Kegg | Link to kegg annotations (78372) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416954.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |