| Id Trinity | FTRINITY_DN49195_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_12978 |
| Sequence | AAAGTAACCAACCAACAGGTGTGGTCGTTATTATGCTTCACAAAGTACAGAGCTAACATCCTCTGAAAGCTGAAACTGTGAGCTTCAAAGTCTTGAACTT CATCCATGTCTCCCTTAAACTCCTCAAACCCATGTCTTCCCAAAACCCATTTCCTCAAAGTCCCAACCTTTGACCCTTTCTTCAAATTCAAATCATTCTC ATTCAATACACATATTCCTCCAAACAGAGCTCATGCTCTTTCATTCTCCATCAACTCTAAACTGAAAAGTTCTCAAGATATTCAAAACAATAAGGGGAAG AAGGGAGTGTCTCAGAAGATTGTCTTATCAGAAGTGACCCCTCCTCCACTTACAGAGAATAATGATGATATCAATGGTGGCAGTGGGAATGGAAATGAGA ATGTTCCAGCAAAGTCAAGGAATAAGAGAGGTGTTTCTGGGTTGGCCAAGATGTTAAGTAAAAGGACATTGCAGATTCTCTCTAATTTGCCTTTGGCTAT TGGGGAAATGTTCACCATTGCTGCTTTAATGGCTTTGGGAACTTTTATTGACCAAGGTGAGCCCCCTGAGCATTATTTCCAGCAATACCCCGAAGATCAT CCGGTGTTAGGATTTTTTACTTGGAGATGGGTTCTAGCTCTTGGTTTTGATCACATGTATTCGTCTCCCGTATTTCTTGGGATGTTGGTTCTCCTTGGTG CATCTCTCATGGCTTGCACTTACACAACACAGATCCCTCTAGTCAAGGTTTCAAGAAGATGGTCATTTTTGCACTCTGCGGAGACTATACGTAAACAGGA ATTTTCAGAATCGTTGCCAAGAGCTTCAATCGAAGATGTTGGTACTATATTGATGGGATCTGGATATGAGGTTATAATATCATAACTCATGCTTCACTAT TTGTTTCCTTTTATTTACATCCTTTAAGATCATCTGGGACATACATTTGGGGAATGATTTACTATCAATCAGGAAAAAGTTTCTTGTAGTTACTAGCCAA CACTTAACTAGAATGATAGGAGGCCGGGATATGACGTGATAGTGACATAAGGATATCGCAAATTCTTAGAACTATAGGGTAAACTATGGCTATGATGCAA GATATGAAATTAATATAAGATTGAGATAAAAGCGCAAATCTTAAAATAGAAGAATGAAGTTTTAAAAGTGAACTTGCGGCATTGTAAACATAATAAAATG TTAAGGTTTATTTAGTTACTGTGACATTTCCATCTATAATGGTGTAAAATTTCAGAAAGTAAATGTAAGAAGTTTTATTATACAAATAGGAGTGTTAGAA CATGTCTAATAGGAATATGTAGACGCCGATTATTTTGAAGTGTCCATGCGTCATAGCTTGAATGTCGTTTTTTGTTTTGACAATGAGTGATTTTGGATTA TAGGTATTCTTGAAAGGACCATGTTTATATGCTTTTAAAGGGCTCGCTGGTCGGCTAGCCCCTATTGGAGTCCATATAGCACTGCTGCTGATAATGGCCG GAGGAACCCTTAGTGCTCTTGGGAGCTTCAAAGGTTCAGTCACTGTGCCCCAAGGGCTAAATTTTGTTGCAGGAGATGTTCTTGGTCCTACCGGCTTTCT CTCTTCTCCTAATGAGGATTTTAATACAGAGATTCATGTCAATAGATTCTTTATGGATTATTATGATAGTGGAGAGGTTTCACAGTTCCACTCAGATCTT TCCCTCTTTAACATGGATGGGAAAGAAGTAATGAGGAAAACAATTAGTGTAAATGATCCTTTGAGATATGGTGGTATCACAATATACCAGACAGATTGGA GTATTTCGGCGCTGCAAATTCTCAAGAACAATGAAGGACCTTATAACTTGGCTATGGCACCTCTACAGATAAATGGAGATAAGAAACTTTATGGTACTTT TATGCCCATTGGAGATGTTAACTCTTCTGATGTTAAGGGAATATCTATGCTCGCTCGTGATCTGCAGTCAATTGTCCTTTATGATGCGGACGGGAAATTC GCAGGAATTAGGCGACCTAATTCAAAGCTCCCGATCAATATTAATGGCACAGAAATTGTCATTCTTGATGCAATAGGGAGTAGTGGCTTGGACTTGAAGG TATAACCTTAAACTTAATTTAGCCAGTGAGTTATTTTTACCTTTGTTCACTGTTTATGCAGACTGATCCAGGTGTACCAATTGTATATGCTGGGTTTGGT GCTCTAATGCTCACAACCTGCATCAGCTATTTATCTCATTCACAAGTAAAAATTTCTGCTAAAACTTTTCAAGCATTATACTACTCAATATTCATATCTT AGTGCAATGGCTTTAGAAAAACATTGTTTGACTTGTTCCCTCTTTTAATGTTGCTTACATTTTTCAGCTTTTAAGACAAATGACGATAGTGACATGAACA TATTTCTCGTTTAGATTATAGCATTGCTATGTCGCCTCGAAAATTTCCTTCTAAAGAAGGGGATCGATAGCTGCGTGTATTTTGTTTAATAATCATGTCC ATGTTTTAATGCAGCACACAGTTGAATAAATAGCAGCCATATATGACTAGAAGAAAATAAGTCCATGACAATTAATGCACTCTTATAGCTTAATGAACTT TCATTTTCAACATTCAATTGTATATTAAAGCTGTTCATTTATTTGTTGATCAATTGAAAGGTATGGGCATTACAAGATGGGACATCAGTGGTTATTGGAG GGAAGAGTAACAGAGCAAAGATGGAGTTTCCGGAGGAGATGAACCGTTTGCTTGACAAGGTTCCGGAAATAGTCCAATCATCGCTATCCGAACAAGCTGG CGGCATTAGGGGCTAGCTTATAGCTTTTGAGACATCAAAATGAGAAATGAAGACTCTTCAATTGGATGATAGCAACTTGCATGCATTATATAGCAATGAT AAAGTTCTTCTTTTGTTGCAAAAGAAGTGCAAGGTTATGAAAGAGAATCAACACCAGTGAGGATTTATAGCGAAATTCACGCATTGTTTGAGAATCAAAT CGAAACCAATGTGACAAGGAGTTCACCTATTTGTCGTCCTTGGCTGATCAGCCAAGGATTTTACCAATAGGCGAACGGAACCTTCAAGAAGTAAATCCAG AAATCTTTTGCAGCTAATTTGATAAGACATATTTACATATATGGAGTTCATTACATGTATATTTAGCATTTTATTATAAATGTGTATCATTGGACCAAAT ATCAAAGCTCATATGTGTTGTATTATTTTGTTCCCTCACTTAAGTAATTAAAATTTGGATAGGTCCATAATGTATAGGTTGCAACTGCACTGGTTTCCTT TACTTTCTATTGTACCAAGTATTCCCTGCATTTGATAAGTGCATCTTCAATACAAGTGTAACAAAAATTACTAAGAATTGAAGGCTACAAGTTTTGTTAA ATAGCAGGTAAGAATAATGTGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_18167; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_12978
| Blastp | Cytochrome c biogenesis protein CCS1, chloroplastic from Arabidopsis with 57.53% of identity |
|---|---|
| Blastx | Cytochrome c biogenesis protein CCS1, chloroplastic from Arabidopsis with 78.57% of identity |
| Eggnog | Cytochrome c biogenesis protein(COG1333) |
| Kegg | Link to kegg annotations (AT1G49380) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413181.1) |
| Pfam | ResB-like family (PF05140.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |