Id Trinity | FTRINITY_DN49298_c0_g3_i1 |
---|---|
Name Transcript | Ll_transcript_209512 |
Sequence | GGAATATGTTCTCTCGCAGAAATAAAAGAGGCATTTGTTTTGGAACCCCGCCGTCTCCACCTTCTTCTCCAACCACAAAGAGCTGACCACAACACAACAT TGGTTCACATCATAACACAACTCAGAGGTTGCTAAGGCTTCACAGATCAATGGCTTCTTCTTCTGTTTTATTCACTGACACTTCTCCTTCCTCTGCCGCT CGCCTCCTCCATCTCCGCCATCGTCACGCCGTCGTTCCCTTCGTACGGCCCCTCCGTGTGGGACCTACCCAATTCCCAACTCCCTTGCGCTTCTCTCTTC ACACTTCTCCCTCTCGTCCTCCTCTTGTCCCCCTTGCTTCCTTGACTACTGAGGCTTCTGCTAAGGTAATTGATGGAAAATCAGTGGCAAAGCAAATCAG AGTTGAGGTAACAGCTGAAGTCTCTAGGATGAAAGAAGCCATTGGTGTGACACCTGGCTTGGCTGTAATCCTTGTTGGGGATAGGAAGGACTCTGCTACT TATGTGCGTAACAAGAAGAAGGCTTGTGATTCTGTGGGAATTATTTCTTTGGAAGCTAATTTGCCTGAGGATTCTACTGAGCAAGAAGTGTTGAACTATA TTTCTAGCTTCAATGATGATCCTTCTGTTCACGGCATTCTGGTTCAGTTACCTTTACCTAAGCACATGAATGAGCAAAACATCTTGAATGCTGTTAGAAT TGAGAAGGATGTAGACGGTTTTCACCCATTAAACATTGGTCGCCTTGCCATGCGTGGAAGGGAACCCCTTTTTGTTCCATGTACACCAAAGGGATGCATA GAGCTACTGCACAGATATGGTGTTCCTATTAAAGGAAAGAGAGCTGTTGTGATTGGTCGGAGCAATATTGTAGGAATGCCAGCTGCACTGCTGCTGCAGA GGGAAGATGCTACTGTCAGTATTGTCCATTCCAGAACCAATAACCCCGAGGAGATCACAAGGCAGGCAGATATTATCATCTCTGCCGTCGGGCAACCAAA TATGATTAGGGGAAACTGGATAAAACCTGGTGCAGTCATAATTGATGTGGGAATCAACCCCGTAGAGGATTCAAATGATCCTCGAGGTTATAGATTGGTG GGAGATGTTTGTTATGAAGAAGCGAGCAAAGTTGCCTCAGCCGTAACGCCAGTTCCAGGAGGAGTTGGTCCAATGACAATAGCTATGCTTCTCCAAAATA CACTCATTTCTGCAAAGAGGATCCACAATTTTGAATAACTTATATGGTCAATTGCAACCTAATGAAAGCATGTGTATCATTTTGACCTATCTATTTTTGT TTTTGGACTATTCTAGAAAGAATAAAAGGAAGTTTCTTCCCCTCCTGAACATCCCAGGTCACTGAATTTGCATCATTATATGATGCACAAATTTTCTAGC ACATTGATATTTATGTTTTAGGAAGAAAAACTCAGGGAGATCATGCAGCAATTAATTCATTAATATTAGGCATAATTAAGAGTATGAAATTAAATGATTG CTAGAGGTAGTATTGCAGTAATGTAAATTAAAGTCTGTTGCAACCGAAACTTGCTGTAGTTTATGATGTTTAATTTATTGAAAACAATAGCGTTAAATAT GATTTTCGACCATACATTTATTGCTCACGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_18328; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_209512
Blastp | Bifunctional protein FolD 4, chloroplastic from Arabidopsis with 75.07% of identity |
---|---|
Blastx | Bifunctional protein FolD 4, chloroplastic from Arabidopsis with 84.67% of identity |
Eggnog | Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate (By similarity)(COG0190) |
Kegg | Link to kegg annotations (AT4G00620) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019426409.1) |
Pfam | Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain (PF00763.22) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |