Id Trinity | FTRINITY_DN49435_c0_g1_i3 |
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Name Transcript | Ll_transcript_95538 |
Sequence | CAAAAGGTGAGCACTGTGACAACGTTCATCCTATGAAATTTGATAATGGATTTGCATACACCATTGGTTAAAAGGTTTAACATGTATACTTGCCATCATT CATCCGTCATCCTAAGATGATATAAATATTACCAGTTTATCTCCCCTTAGCTTCTGAAAAGTCATATCCATTTCAACTTATTACAACAACAAAGCCTTTA TCCCACTATTGGCTATGAATTAGAGGCGGTGGAAGCAGAAGCTAAGGATTCCGAGGAAGAAGCTGAAGATTCCAAGCTGGGGCAATCCGGGGGGAGGAAT ATGAACAGAAGTCCCCTTAGTTCGAAATTTGGTCATCTAGTGACAAAATCGCCAGGGGAGCCATCAAATACCACTTCAGAACATTCTGGTCGACAGGTTT TGCCAAAAGTTAACAATGGTGAAGGCTCTGTAGTTACCCCACGAAATAAGAACATATCTGATCGGGACTTAAGCTTTCACTATATTGATAACATGAAGAT AAGTGCTCAGGCTCCTGATGTTTCTAGACATGCTACATCATCTCAGATGCCTGACACATATGTTAAGATCAGTGCATCTAAGAATGCTGAGTTCTCAAAT GCAATTTCATCTGGTCTGCTACCTGATCCAAATACCGGAACTTCAGAGTCTAAGAAGTTGGTTTGTGACTTGAAATCCTCGACCGCAAGTGCTGAGGGAC TTACACATTCAGATGCTAAGTTTAATTCTACGAGTTATTCTAAAAAGGACCAAAGGAGATTTACTCTTCCAAGGAACTTAGAATGCTCAGGCAATGCAAC CGGCCCAGCTGTGTCACCTTTGGATGATTTCAAATTTGGCAACAACCTTGAAACCTCTTCCACTAAGGTGGAAAATGCAAGTGAGGGAATCAAATATAAC CGTATTGAAGGTTCTGGGAAAGGAAATGATTTTATTAAGGGGGGTGAAGCATTTAATTTATTGCCTCAAAAGAGGATAAAGGAAGCTTCTTCTACTAAAT TGAAAACAAGAAAGATGACTACCGATGCAAAATTGTCCAAGGAAAGAACCCCGTTATCAAATGGCAAATATCGAGCATTAAAAATGGCATCACTGGTTAA TGAACCACATGAGGCTGGTGGGTGTGTTTCTGCTGGCATAGATGGTTTAAGTAACTCAAACATTTGTTCAATTTCTAAATCTGAAGCTTCTAACTCCAAG TCAATGGCATTTGATGAGCCATTTTCAAGAAATGCAAGCTCAGAGTCTGCTCAATGTGATAATGCCTGTCAGTATTCAGCACAAGCAGCTATTCAAAGCT TATGTGAGTCTAAAAAAATTATGGGCACACCTGATTTTACAGGTTTGGAAATTAGACAAGTTGATGATGGTCATGAAGCAGAGCAACATAATATCATGAA AAATCTGGGCTGTTCAACACCTGGTAACAAAAAGTCACCAAATGAGGAATTCATTGGTCTTGTTCATTTGGATTTAAGCAATGAAGAAAGTGGCAAGCTG ATTAGAAAATCACCCCGCAAGAAGTCAGTTGCCAAGAAAAGTTCGGGTTGTAGACCTAAAGTAGGTGATTCTGCTAAACAGAAAAGATCAGTTCCCTTGA ATGAAACTACTGTGCAAGGTGAAGGTGTAAGTTTTTTTAGTGGAAGCGAAGAGATAGCTACTTGTGATCTGAAGAAGCTTAAGGCGTCCCCCAAAATCCT TAATCTTAATAAAGAAAAAGGGCAAGAGACCATTGGTAAATATGCAGAAGATGCTGGTGGCAAAATAAATTTTTTTGATGATGAAACAGAGGCTCCAGAT GACAAATATCAAGATGAGTTGGGAATGTCACTTGATGAAAACAAGTCTGAACTGGTTCATGTTTCTAAAACAGTAAACACAACAAATGTGCAATCAAAAG CAACTCACCATATGGCAGAATATGATGAAACAATGCCTCAAAAGAGTAACAAAACTGAAACAGAAAAACAGAAGCCACCTTCACTGCTTGACTCAACCTC AGAGTTAAAAGTAAAGCATAGAACGACAAAACGTCCTGCAGTTAGAACTAAAAAGACCACAGTTACCAAGGATGTGTTGAAATCTGCTGAGGCTGTATCT GTGGAGAAGAATCATAATGAGAGGAGACATGAGGCAGAGATGGAAATCCCTGATGAAATGCCCCCCCTGGCTGATATAAGTGATCACTCAACCTCAAAGT TAGTAGTAAAGCATCAAAGGACAAAACGTCCTGCTTGTAGAACCAAAAAGACCACAGTTGCCAAGCATTTTTCAAAATCTGAAGAGGCAGAAGCGGTGGA GAAGAATCATAATGAGAGTAAACATGAGGCAGAGATGGAAATCCCTGGAGAAGTGCCCAGTGAGCGCTCATCCTCAAAGTTAGAAGTAAAGCACCAATTA AAAAAAAGTCCTGCAGGTAGAACTAAGAAGTGCACAGTTGCCAAGAAGAACTCTGAAGAGGCAGTATCTGTGGACAAGATTCATACTGAAAGGGAAAATG AGGCAGAGATGGAACTACTGGAAAAGATACCCCCTCCCGCTGATTTAGCTGAGAGCTCAACCGCACAAAGAAATAAGTCAGATAATTTTATTGAAGAGGA CAAGGAGAATAGACCAATTGATGGAGCAGTAGATGCTGTAAAGAGCAAAAGCATTGGAAGTCGAATTATTAAATCTATTGCAAGGCCAGTAAAAGCTGAC TCTACGAAAATGGGTCCTAATTCATCAATATCAGAAGCTAACACAAAAGCAAAAACTGAAGCGGCATGTTTTTTGGTAAGTGGTCATCGGCTACAAAGAA AGGAGTTTCAACAAGTAATCAAGCGTTTAAAAGGAAGGGTTTGCCGGGATTCTCATCAGTGGTCATATCAGGCAACACATTTCATAGTTCCAGACCCTGT ACGCAGGACGGAGAAATTTTTTGCTGCTGCTGCATCAGGAAGGTGGATTCTTAAAACTGATTTCTTAACTGCCAGCACCCAAGCAGGAAAATTGTTGCCA GAGGGGCCTTATGAGTGGCACAAGAGTGGTCTCACTGAGGATGGAGCAATAAATATGGAGGCTCCGAGAAAGTGGCGACTGTTGAGAGAGAGGACAGGTC ATGGCGCTTTTCATGGAATGCGCATTATTGTATATGGTGATTGCATTGCCCCACCTTTGGATACTTTGAAGCGTGTGGTCAAATCTGGAGATGGAACAAT ATTAGCAACTTCTCCTCCTTATACCCGTTTCCTTGACACTGGGGTCGACTATGCCATAGTTAGTCCTGGCATGCCACGTGTTGACGTGTGGGTCCAAGAG TTCTTAAAACATGAGATACCTTGTGTTTTAGCGGACTACTTGGTCGAATATGTCTGCAAACCTGGGTTCTCCCTTGAGAGACATGTACTATATGGCACTC ATACTTGGGCAGAGAGGTCGTATGATAAACTTCAAAGCAAGGCGGAAGAGATTATTGAGGAACTCATTCCTCCTAAAGTTTGTGATGAGGATAACAAGGA AGAAGATGCAATTTGCCAAGTATGTGGATCCGGGGATAGAGGAGATGTAATGCTGATTTGTGGTGATGAAAAGGGTTCTGTTGGTTGTGGAGTTGGTACT CATATTGATTGCTGTGATCCTCCACTCACAGAAGTTCCTGAGGAAGATTGGTTTTGTCCAAAATGCAATGAAACCTCAAAGTGCTCAAATTCTTCCAAGA AAAGGAAAAAGGGTGTCATGTCTTCATCAAAGAGGGAGTGATATGCTCTTCCCTTTGAGTCAGTCATCGTATAGGTAACTCGCCTGAATTTGTAATAATC AGTGGTGACTGAGCACCTTGTACTTAACTGTTCCTAGATAGTTGTCATAATGTGTGATCCTTAGTGATTATCAAACTAATGTAATGTTGATTTGAAAACA TGCTTGCTTAGCATTTTATATGGGACTCAACAGTAAAGACTAAAGAGCAATGTGCCTATTTTTAAACTGTCTGATGTACTGCGTCTAGACAAGCTGTTGA CTTACGGAGTTGTTGACCAAAATTTATTATGCAAAAATTGGTTTACAATCAAGTAGAGGGAAAATTAAAGCACTTCAAATCTAAGAGGGTTTCCCATCTG CAACAGTAAGACTTCTTTTCAAAATTCAAGTCTTGGAGCAACATGTGCTTTGAGGTATGAACTGACAGCGTTGAAATTAAAAGGGATTGAAATAAAAATG GAAGAACAACACâBLAST |
Tissue | flowers |
Gene name | LI_gene_18550; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_95538
Blastp | BRCT domain-containing protein At4g02110 from Arabidopsis with 70% of identity |
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Blastx | BRCT domain-containing protein At4g02110 from Arabidopsis with 70% of identity |
Eggnog | Topoisomerase (DNA) II binding protein 1(ENOG410XPFH) |
Kegg | Link to kegg annotations (AT4G02110) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428149.1) |
Pfam | BRCA1 C Terminus (BRCT) domain (PF00533.25) |
Rfam | - |
GO | - |