| Id Trinity | FTRINITY_DN49459_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_95714 |
| Sequence | CTTATTCAATCAAGATTGAAAAACAAGATCTTTTCAAGTACGGTTGACGATCAAATCAATGAAATAATCCGACCCGGTTTTCAGAACATTCGAGATATGT GTCCGATATGGATTGAATTGGGCCGAGGTGAAGTAAAGTATAATAAAATTGAAAATATAGAGTGAAGAATAAGAAGAATAGGAAAAAATGGGTAGCCTAG AAGAAGAAGAAGTAATGGGTGAAGTTGAAGCCATGGAAGCTGTTTATGGAATCGATTTTCATCTTCTTCGTTCATTCCCTCCTCTTTTTCATCTTTCCCT TTTCCCTAGAACCGCTGATGATTCTTCCCAACAGTTTGTTGAAGCTATTATAGAGATACGAGCAACCCCTCAGTACCCAAGGGAACCACCTTGTGTTGAT ATTGTGGATTGCAAGGGTATGGATGAGAAGAGAAGAAAGCATTTATTACATCATATACAAACTAAAGCCCAGGAGCTCTGTCCCGGTTTCATGCTTGTTG CTCTATGTGAGGAAGCAGTTGAGAAACTTTCAGCTATGAATCATCCTGATGGCGATTGTCCATTGTGCTTGCTCCCTTTGGTCCCAATAGATCAGCAGAG TGAAACCTTGCCTTTTATGAAGTTAATGTCTTGCTTTCATTGTTTTCACAGTGAATGTATCATTAGATGGTGGAATTATCTTCAAAAATCTAAAGAAAAA GACTCTGCCAAGTCAGATAACTATAAAAAAGTGGAAGAGGGTATTGGAAACTGCCCGGTCTGTCGCAAACCTTTTCATGCCAAGGATCTGGAGCATGTGC TCGACCTAGTTGGTTCACATTCTTCCCAAGTAAGTTTCGATAGTGATAAGGCAATTGATGAGGAAGAGCTCCTTCAATCCGAGCATGAGATCATTAGGAG ACAGAAATTTGAAGCCATCTTAAATTTGCAGAAGGAGAACAGTGGTCTCATTGAACCCAAAAAAGATTTAGTAATATTGCCCGGTATGTACCTTCCACAA CCAGTCGCAACTCCGAGCTCCACACCAACCAATGAATCTGATGAGCAACAAGAAAAAGATATACCTACAGTCATCTCCGAAAAACATGCTGGTGAAACCT CGAACGCGCCTAGTTCTAGCAGGCACAAGAATTTCGGTGCAGGGAGGCAGAGACCAAGAAGTGATAACCACTCTAGTTCGACCGTACGAAATCCGAGAAA ACCAGTCCAACAACAGTGGGTTAGAAGAGATAATAATCCTAGCAGTAAGCAATAGAAGGTATCTCTCTGACTTCTATAGTTCATATTTTTTGTTATATAT CAGACTGATGTTTTAACTTTGTGGTTGCAAAGAAAGATACAAAACTTATAGTTGAGGACAGAGATTGAGACACATTCCCTTCCCCCTTTTCTTTGTAGGG GTGTAAGGTTGTTGTTGTTGGAAGAGTAAGCAAAAAAGCAAAGAGATATAGATGATGCTTAATTTTTGTGCAAATTCCTGAGTTTTCATTTTCTATTTTG GGTTGTCATAAAGTTTCTTTCTAAAGCTCCACCCTTGTAATTTGTGTTACATTTAGCAACTAAGTTGCAATGTTCAGTATTTTCTTGTGATGTTTATTCT ATTCCTGGTTATCAATTCTGTCTTTACATTATTACCAAATTATATGATGCTCAGTTTGAAATTTTGAATATCAATGAAGTATAAAATATATATTGTTCCT CA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_18583; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_95714
| Blastp | E3 ubiquitin-protein ligase RNF25 from Bos with 24.36% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RNF25 from Bos with 23.1% of identity |
| Eggnog | RING finger protein 25(ENOG4111H5K) |
| Kegg | Link to kegg annotations (511571) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464814.1) |
| Pfam | RWD domain (PF05773.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |