Ll_transcript_157500

• Id Trinity: FTRINITY_DN49692_c0_g1_i1
• Name Transcript: Ll_transcript_157500
• Sequence: AATAGAGTTGTGAGTGATGATGATGATGATAATGAAGGACAAACTGAAACTGAAACTGAAATTGAAATTGTGTTATTTGTTCACAACTCATTCTCACACT CACTCACTCTCACTCTTGGATTCCTTCATCTCTATCTTCACCAAACAACCCTTCATTCCTAACTCCCCTGAACTCACGCGCCTCGCTCCCACCCTCACTC CTCACCTCGTCGAATCTGTCCTCACGCGCCTCCGCTCCTGGAAACTCGCTCACACCTTCTTCCTCTGGGCCTCTACCCAACACCCCTATTTCCACCACAC TTGTTACACCTACAATGCCATGGCTTCTATCTTATCCCGTTCCCGCCAAACTAATCTCTTAAAAATGCTCGCTTTTGATATCCCTAACTCCAATTGTTCC TTTACTCCTGGTGCATTGGGTTTTCTCATTCGCTGTCTTGCCGGTCTTGGCTTGGATCAACAAGCCAACCACCTGTTTGATGAAATGCGCGTCAAGGGTC TTTGCGTTCCGAATGATTATTGTTATAATTGTTTGTTGGAGGCTTTATCTAAGAATGGCGGGGATGTTGGTTTGATGGAGATGAGGTTGAAGGAGATGCG TGGATTGGGGTTTGAATTTGATAAGTTTACGTTAACACCGGTGATGCAAGTTTATTGCAATGCTCGTAGGTTTGATGAAGCTTTGAGTGTTTATAATACA ATGCAGGAGAAGGGTTGGGTTGATGAGCGTGTTTATGCTATGCTCGTGTTGTCTTTTAGCAAGTGGGGAGAGGTGGATAAGGCTTTTGAGTTGGTGGAGA GGATGGAGGGACAAAGGATGGGATTAAATGAGAAGACTTTCTGTGTTTTGATTCATGGGTTTGTGAAGGAGGGGCGCGTGGATAAGGCGTGCCAACTGTT TGATAAAATGCTCATGGCAGGTTTCGTTCCTGATATTTCGTTGTATGATGTTCTCATTGGAGGGCTGTGCAGGAATAAAGAGGGTGACAAAGCATTGAGT TTAATTTCGGAAATGAAGGAATTTGGTATTCAGCCTGATGTTGGAATTGTTACGAAGTTGTTATCATCTTTTTCTAACAGAAGTATGATTGTGAAATTAC TAGAGGAAATTACGGAAGAGGAAGATGACAAAACCGTTGTTCTGATTTACAATGCTATTCTGAATGGTTATGTGGATGATGGGTCGACTGATGAAGCGTA TCGCCTTCTTCAGATGATGATTCAAAGCAAATCTAGTAGTGGTGGTGAGATGAATAGTTTCTTTTGCATCAAGATATTGGTTTCTCCTAATACCACTTCC TTTAACATTGTTATTGATGGCTTACTGAAAAGTGGTCAGTTGGACCTTGCCCTAAGCCTTTTCCATGATATGCAACAAATTCATTGTAAACCAAATATCT TGATCTTTAACAATCTGATCAATGATCTCTGCCATTCTAATAGATTGGAAGAAAGCTTTGAGCTCTTGAGAGAGATGGAAAAAGCGGGAATTGGACCAAC TCATTTCACTCACAACTCAATTTATGGATGCCTATGTAAAAGAAAGGATGTTTTAGGAGCCATCGATATGTTGAAGTTGATGCGTTCTTGTGGGCATGAA CCATGGATAAAACATTCCACCCTTCTTGTGAAAGAGCTATGTGATCATGGGAGGGCTTTAGAGGCGTGTAACTTTCTTATCAACATGGTTCAAGAAGGAT TCCTTCCTCATGTAGTTTCCTATTCTGCAGCTATTGGTGGCTTGATCAAGATTCAGGAAGTCGATCAAGCATTGAACTTATTCAGGGATTTGTGTTCTCG TGGCCGCTGTCCTGATGTGGTTACTTTTAATATATTGATAAGAGGGCTCTTCAAGGCCAACAGATTCACAGAGGCTGAAAATTTACTGGATGAGATTGTT ATGATGGGTCTTTCTCCCTCAGTTGTTACCTACAATCTGCTTATAGATAATTGGTGCAAAAGTGGTTATGTTGATAAGGCTATGGCGCTTCTTTCCAAAA TGTCTGGAGAGGACAGGGACCCCAATGTCATTACATACACAACTTTGGTGGATGGTTTATGCAGAGCAGAAAGACCTGATGATGCTGTTTCAGTATGGAA TACGATGGAAAATAAAGGCTGCTCTCCAAATCGAATTGCTTTTATGGCACTTATTCACGGCCTTTGCAAATGCAGTAGGCCCACTGCAGCTGTCCGTTAC TTACGTGAGATGGAACAGAAAGAAATGAAACCTGACTCCTTCATTTATGTTGTGTTGCTAAGTGCTTTTCTGTCTGATCTGAATTTGACCTCTGCATTTG AGATTTTCAAAGAGATGGTCGATTTAGGATTTTTTCCAGAACCACGTGATAAAAATTATCCCATTGCAATTGATGCAATACTTAAATTTTCCAAGGATGA CAGAACGTCTTCAGCTACCCAAGTACTAATCGAAGAGGGGAAAATTCCTAGACATTGTCTCTGAACTGTTGGAAGTGAAAGGTCGGTCAAATGTAATCAA CCATTTTTGGCCATTGCTAAAGGAAGCTATTGTACTGGAAATAAAAGGAACTCTGCTAGATATCATATTGACAGATTAGGGATCAAAACAATTTACAGAA AACCGTATCTGTTATTCTGTTATACTCCAGTTATAATTTGCCTACAGAGAGAATGTGAGCTCTGGAATTTTTTAAGCTGAAAAAGAAAATCACATGTGCA ATTTTTAAGCTGAGAAGGTGAGTCTCAGCGTAATGGTAAAGTTGTTGCTTAATGGCCAAGAAGTCATAAGTTCAAATCCTGGGAACAACTATTCACTTGC AGGGTAAGACTGTGTACATTTACTCTCCCCGACCCCATTAGATGGAAGCTATGTGCACCCGGCACAATTTTTTTAGATGAGCATCTCATAATTTTCTCTG TTTATAGGTACTGTTTTAGAGCCTAATCTTGCTTTCTTTTGATGACCGAGTGTTTTTTTGGCACTGCTGAAAAAGTAATGTAATGTTAGCTGCACTAACC CCCATTGGGAAATAGGGACTATTGGATAGTAAGTATATAAGGTAAAGGGGAGAGACAGAAAGAGAAAAAGTGATGATGTAAAGTATGTGACTTATTTGAG AGAAGAAATATTATGTAAATGTAACATTCCTCCCAGCCATGGGAGAGAATGTCACAGCTCTAGTGTTGTGGCTATAGTTATTTGTCCTAGTGCTGCTACT CATGCAATGCTCCTTAGTGCTTAGTACTGTCCTCTGTATATTTACCTTCTATTGATTAATAAGAAAATAACTCAAAGCATAGGATGCTTTAGTTACAAAG GTGTTGCATAGTAAGTTAATATCAAAATCTTGGTAACCATTGTAGTGCCTATTTTAGGGATTAATCCTTCATAGCCTTGTGTGCACTGGGTTGCCAATTT TTTGTCTGGAATCCTTCATAGGTTTATTGTACATCACAACACATGATGACTCAGAAGAAACTTACTATATGCTGAATATTGTTGTACATCAACATATTGG CTATCATGGAGACAATCAAGAAAGTAGTTCATTTAATGATCCATCAATAGAAGGTGATTTACTTTTCTTTTCACCAAATTGGTCTTACACTTTGTAACAA TAACTTTTTGTGTGCAAGAATCACTGTTGGAACCTAG
• Tissue: flowers
• Gene name: LI_gene_18924;
• Additional information: details;

Expression of Ll_transcript_157500

FPKM

• FPAB: 0.2
• FPNAB: 0.6
• LF1: 0.5
• LF2: 0.3
• LF3: 0.4
• LF4: 0.2
• UF1: 0.5
• UF2: 0.4
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_157500

• Blastp: Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 49.94% of identity
• Blastx: Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 50.39% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G08310)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427774.1)
• Pfam: Pentacotripeptide-repeat region of PRORP (PF17177.3)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;