| Id Trinity | FTRINITY_DN49692_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_157501 |
| Sequence | AATAGAGTTGTGAGTGATGATGATGATGATAATGAAGGACAAACTGAAACTGAAACTGAAATTGAAATTGTGTTATTTGTTCACAACTCATTCTCACACT CACTCACTCTCACTCTTGGATTCCTTCATCTCTATCTTCACCAAACAACCCTTCATTCCTAACTCCCCTGAACTCACGCGCCTCGCTCCCACCCTCACTC CTCACCTCGTCGAATCTGTCCTCACGCGCCTCCGCTCCTGGAAACTCGCTCACACCTTCTTCCTCTGGGCCTCTACCCAACACCCCTATTTCCACCACAC TTGTTACACCTACAATGCCATGGCTTCTATCTTATCCCGTTCCCGCCAAACTAATCTCTTAAAAATGCTCGCTTTTGATATCCCTAACTCCAATTGTTCC TTTACTCCTGGTGCATTGGGTTTTCTCATTCGCTGTCTTGCCGGTCTTGGCTTGGATCAACAAGCCAACCACCTGTTTGATGAAATGCGCGTCAAGGGTC TTTGCGTTCCGAATGATTATTGTTATAATTGTTTGTTGGAGGCTTTATCTAAGAATGGCGGGGATGTTGGTTTGATGGAGATGAGGTTGAAGGAGATGCG TGGATTGGGGTTTGAATTTGATAAGTTTACGTTAACACCGGTGATGCAAGTTTATTGCAATGCTCGTAGGTTTGATGAAGCTTTGAGTGTTTATAATACA ATGCAGGAGAAGGGTTGGGTTGATGAGCGTGTTTATGCTATGCTCGTGTTGTCTTTTAGCAAGTGGGGAGAGGTGGATAAGGCTTTTGAGTTGGTGGAGA GGATGGAGGGACAAAGGATGGGATTAAATGAGAAGACTTTCTGTGTTTTGATTCATGGGTTTGTGAAGGAGGGGCGCGTGGATAAGGCGTGCCAACTGTT TGATAAAATGCTCATGGCAGGTTTCGTTCCTGATATTTCGTTGTATGATGTTCTCATTGGAGGGCTGTGCAGGAATAAAGAGGGTGACAAAGCATTGAGT TTAATTTCGGAAATGAAGGAATTTGGTATTCAGCCTGATGTTGGAATTGTTACGAAGTTGTTATCATCTTTTTCTAACAGAAGTATGATTGTGAAATTAC TAGAGGAAATTACGGAAGAGGAAGATGACAAAACCGTTGTTCTGATTTACAATGCTATTCTGAATGGTTATGTGGATGATGGGTCGACTGATGAAGCGTA TCGCCTTCTTCAGATGATGATTCAAAGCAAATCTAGTAGTGGTGATTGGAAGAAAGCTTTGAGCTCTTGAGAGAGATGGAAAAAGCGGGAATTGGACCAA CTCATTTCACTCACAACTCAATTTATGGATGCCTATGTAAAAGAAAGGATGTTTTAGGAGCCATCGATATGTTGAAGTTGATGCGTTCTTGTGGGCATGA ACCATGGATAAAACATTCCACCCTTCTTGTGAAAGAGCTATGTGATCATGGGAGGGCTTTAGAGGCGTGTAACTTTCTTATCAACATGGTTCAAGAAGGA TTCCTTCCTCATGTAGTTTCCTATTCTGCAGCTATTGGTGGCTTGATCAAGATTCAGGAAGTCGATCAAGCATTGAACTTATTCAGGGATTTGTGTTCTC GTGGCCGCTGTCCTGATGTGGTTACTTTTAATATATTGATAAGAGGGCTCTTCAAGGCCAACAGATTCACAGAGGCTGAAAATTTACTGGATGAGATTGT TATGATGGGTCTTTCTCCCTCAGTTGTTACCTACAATCTGCTTATAGATAATTGGTGCAAAAGTGGTTATGTTGATAAGGCTATGGCGCTTCTTTCCAAA ATGTCTGGAGAGGACAGGGACCCCAATGTCATTACATACACAACTTTGGTGGATGGTTTATGCAGAGCAGAAAGACCTGATGATGCTGTTTCAGTATGGA ATACGATGGAAAATAAAGGCTGCTCTCCAAATCGAATTGCTTTTATGGCACTTATTCACGGCCTTTGCAAATGCAGTAGGCCCACTGCAGCTGTCCGTTA CTTACGTGAGATGGAACAGAAAGAAATGAAACCTGACTCCTTCATTTATGTTGTGTTGCTAAGTGCTTTTCTGTCTGATCTGAATTTGACCTCTGCATTT GAGATTTTCAAAGAGATGGTCGATTTAGGATTTTTTCCAGAACCACGTGATAAAAATTATCCCATTGCAATTGATGCAATACTTAAATTTTCCAAGGATG ACAGAACGTCTTCAGCTACCCAAGTACTAATCGAAGAGGGGAAAATTCCTAGACATTGTCTCTGAACTGTTGGAAGTGAAAGGTCGGTCAAATGTAATCA ACCATTTTTGGCCATTGCTAAAGGAAGCTATTGTACTGGAAATAAAAGGAACTCTGCTAGATATCATATTGACAGATTAGGGATCAAAACAATTTACAGA AAACCGTATCTGTTATTCTGTTATACTCCAGTTATAATTTGCCTACAGAGAGAATGTGAGCTCTGGAATTTTTTAAGCTGAAAAAGAAAATCACATGTGC AATTTTTAAGCTGAGAAGGTGAGTCTCAGCGTAATGGTAAAGTTGTTGCTTAATGGCCAAGAAGTCATAAGTTCAAATCCTGGGAACAACTATTCACTTG CAGGGTAAGACTGTGTACATTTACTCTCCCCGACCCCATTAGATGGAAGCTATGTGCACCCGGCACAATTTTTTTAGATGAGCATCTCATAATTTTCTCT GTTTATAGGTACTGTTTTAGAGCCTAATCTTGCTTTCTTTTGATGACCGAGTGTTTTTTTGGCACTGCTGAAAAAGTAATGTAATGTTAGCTGCACTAAC CCCCATTGGGAAATAGGGACTATTGGATAGTAAGTATATAAGGTAAAGGGGAGAGACAGAAAGAGAAAAAGTGATGATGTAAAGTATGTGACTTATTTGA GAGAAGAAATATTATGTAAATGTAACATTCCTCCCAGCCATGGGAGAGAATGTCACAGCTCTAGTGTTGTGGCTATAGTTATTTGTCCTAGTGCTGCTAC TCATGCAATGCTCCTTAGTGCTTAGTACTGTCCTCTGTATATTTACCTTCTATTGATTAATAAGAAAATAACTCAAAGCATAGGATGCTTTAGTTACAAA GGTGTTGCATAGTAAGTTAATATCAAAATCTTGGTAACCATTGTAGTGCCTATTTTAGGGATTAATCCTTCATAGCCTTGTGTGCACTGGGTTGCCAATT TTTTGTCTGGAATCCTTCATAGGTTTATTGTACATCACAACACATGATGACTCAGAAGAAACTTACTATATGCTGAATATTGTTGTACATCAACATATTG GCTATCATGGAGACAATCAAGAAAGTAGTTCATTTAATGATCCATCAATAGAAGGTGATTTACTTTTCTTTTCACCAAATTGGTCTTACACTTTGTAACA ATAACTTTTTGTGTGCAAGAATCACTGTTGGAACCTAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_18924; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_157501
| Blastp | Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 52.6% of identity |
|---|---|
| Blastx | Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial from Arabidopsis with 53.39% of identity |
| Eggnog | Pentatricopeptide repeat-containing protein(ENOG410Z7Z7) |
| Kegg | Link to kegg annotations (AT5G08310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427774.1) |
| Pfam | PPR repeat (PF01535.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |