| Id Trinity | FTRINITY_DN49709_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_198910 |
| Sequence | CAACAACCTGAATGGTTCATTTTCACTTAACTCCACTATATACCCCAAATTGAAGGATCAAATCAACAAAACCATACCTCTACGACCAAATCCAATTCCA CTTCTCTCTTTTAAACACAACCATGTCCCAAACCTGAAACTCCAATCATCACAAAATGGAACCAATTCCTCATTCAATAATAACCCCTTCCATCAAACCC AACTCACTTATCATTTACACATCAACTTCAAGATTTCGATCTTCCAACAACATAACTCTCCCTTCTCCGTTACTTTCACTCAAACCCTTCTTTTCCGTTA AATCTCTCTCTCTCCGTCACCGAACTCTTCGTTTCGTCGCCAAATCCACCACTAGCCACAGAGACCATGACCATCACCATGACCATCATGAACATCATCA TGACCACCATGGACATCATCATGACCATCACCATCACCACCACCACCATCATCATTCGCACGGAATCGACAGTGCGAATCTGACGGGACCACAGAGGGCG GTTATTGGTTTCGCGAAAGCCAGCAGATGGATGGAGTTGGCTGACTTCCTAAGAGAGCATTTGCATCTTTGCTGCTTTTCAACTGCCTTGTTTGTGACTG CTGCTATTTGTCCTTATGCCTTGCCTAAGCATCTCATCAAACCCTTTCAAAATTCTCTCATTTTCGTTGCGTTTCCTTTCGTTGGGGTTTCTGCTTCACT TGATGCTCTTATTGAGATTAGTAGTGGAAAAGTGAACATCCATGTGTTAATGGCAATGGCAGCCTTTGCGTCAGTTTTTATGGGAAACGCGTTGGAAGGA GGCTTACTTCTTGCCATGTTTAATCTCGCACATATAGCTGAGGAGTATTTTACCGGTCGTTCAATGATTGATGTTAAGGAATTGAAGGAAAACAATCCGG ATTTTGCCCTTGTTCTGGATACGATTGATGGTAAACTAGCTAATACCATTGACTTGGCATACAAGAGGGTTCCCGTGCATGATGTGACTGTAGGATCATA TGTCTTGGTTGGTGCTGGTGAGGTATGTTTTTTTAAATTTGATGCCTTGCAATATCTACAAATTTTGAATTGGTTGAACTTAATTATAATTTCCTTCAAA TTCTAGAAGGTAAAACGGTGACTGTTGTCTTGTGTTGGATTTTAAAGTTTTAAACTGGCTAAGCAGTTTTTACTGCAACCATAAGCTAGACTTTTTAACA GTTTGTGGAGGCTCAGATATAGACCCTTGCATATAGTGTGCTGTATTATAAATTTATGACTATTTTTTAATATATAAAATTATTGATGTCCAAAGGTAAA ATGAAATATACTTTATCTTGTGTGCACAATAATATTGAAATATTTTGAACATGATACTTTTAGTAGAATATATCATCCTTCTTTTATACAAATGAGTATA TCAAGTATGTAACCTGCATCAAACTAAGCTGTAAAATCAATTTGGTAATAGAAATGCTTTTCATGGCAATAATCCTTTCTAAGGACATCAATTTTCAAAT TTTGTATATGGGTGTCCATTATGGCTTTTGCTTGACATTTTATATTAGAGATATCAGTAAGATTTGAAAACATAACAGATAGATATAAAGACGAACTTGT ACAATTTGAGTTTCAAGTCTTATTATACAGCAGACATTGAAGTATAATGGGGATGTATTGTGATTAGACTGTGCCTGTAGATTGTGAAGTTTTCCAAGGT GGTGCCACCATTACCATTGAACACTTGACAGGGGAAGTCAAACCATTGGAGGCCAAAGTTGGAGATAGAATTCCCGGTGGTGCAAGGAACTTAGATGGGC GAATAATTGTTAAGGTAACAAAGACATGGAAGGAATCAACTCTCAACAGAATTGTGCAGTTGACTGAGGAAGCTCAGATGAATAAACCTAAACTTGAAAG GTGGCTGGATGAATTTGGTGAACGCTACAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATTGCTGTTATCGGTCCACTTGTATTTAAGTGGCCATTCATT AGTACACCCGCTTGCAGAGGCTCTGTTTACCGAGCCCTAGGACTCATGGTGGCAGCATCACCATGTGCCTTGGCCGTGGCACCATTGGCATATGCTACAG CAATCAGCTCTTGTGCAAGAAAGGGTATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGACAGGAAC ATTGACGACTGGTGGACTTGTGTTCAAGGCAATTGAGCCCATTTATGGTCATCAAATTAGAAACATATCTAATGTTTCTTCCTGCTGCATTCCCACCTGT GAAAAAGAAGCTCTTGCTGTTGCTTCAGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCAT CTGTTTCCATTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACGGCATTCAGTCAGGAACTGGTGGGGATAAAGTATTGAAAGC AACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGAT TTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTAACATTGATTCACCTAGAGGATAGACCTCGTCCGGGGGTTGTTGATGTTATTCAAGAATTGCAAG AAGCAAAATTTCGTGTGATGATGTTAACTGGTGATCACGAGCCTAGTGCTAGGAGAGTTGCTAGCGCTGTAGGTATCAATGAGTTTTACTGCAACCTGAA GCCTGAAGATAAACTGAGCCATGTAAAGGACATCGCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTGCA GCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGCCATCGCTGTTGCAGATGTATTGTTGCTTCGAGAAAATATTTCTGCAGTGCCAT TCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCATTATCCTGCATCGTCATGGCTGCTCTTCCATCTGTTTTGGG ATATCTTCCTTTGTGGTTAACGGTATGAAATTCAATTTAATTTTATGCCGGATCATATTGCTGTTCGTCAGTCATGTCTCATAGTCTCTGTAAACATGAA GAATGTGATTCTGATGTGAAACATTTATTTTCTTTTAGCATTTTTGTATTTTTGTTATCATAAAGCAGTGAATAACTTGAACAAACATCTAGTTATCATG ATAGATTTTTAAGGTTCAGCTGTGCCTATACCAGTTTTCTGGGAAATAAAAGACACAAAATTAGGTGAATTATGACAAGGTGGTAATTTTGTTGTTAAAG AAACTGAGCTCACTAGAATTCCTGCAAACTATGTCCTTGAGAATAGGACCTTTACCTTATGACATTGAAGTCAAATCTTCAATTGCTTCTCTCTGAAACT TCCAAGTTTGTCTTTTTAAGTCTCGTTATCCTTTACATGCATGCAGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTGTGCCTCAATTCGATACGTGGT TTAAATGAACCATCTTGGTCCTGGAATCATGATATATTACAATTGATTAGCTGGGTTAATTCTAGATTACAGTCTCTCAGGACAAATATCAATAGCAAAA GCAGCATCACAACTGCAAATTTGTAAGTTACAGTCATATGAAGTAGAGTATTTTGCTTATCTGTATTCTGTTTATTTCAACAAACAAACCTTAGTTTCAT TGCATATGTGTATTTGATGCTATACATAGTTGGTTCTATTCCCGAATAAAATGTGTAGACTTTGTCAAATCTTTATGATGTACGTTTATCTATCGAGAAA AATGTTAATACCCCTTGTATATCTATAGGCATTTTTCTCATAGCTAATGGAACATTGCCTATTATTTTATGCTAGTCTCCCTATTTTTTAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_18948; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_198910
| Blastp | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 80.53% of identity |
|---|---|
| Blastx | Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 80.86% of identity |
| Eggnog | p-type ATPase(COG2217) |
| Kegg | Link to kegg annotations (AT4G37270) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434685.1) |
| Pfam | E1-E2 ATPase (PF00122.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |