Ll_transcript_198913

• Id Trinity: FTRINITY_DN49709_c0_g1_i4
• Name Transcript: Ll_transcript_198913
• Sequence: CAACAACCTGAATGGTTCATTTTCACTTAACTCCACTATATACCCCAAATTGAAGGATCAAATCAACAAAACCATACCTCTACGACCAAATCCAATTCCA CTTCTCTCTTTTAAACACAACCATGTCCCAAACCTGAAACTCCAATCATCACAAAATGGAACCAATTCCTCATTCAATAATAACCCCTTCCATCAAACCC AACTCACTTATCATTTACACATCAACTTCAAGATTTCGATCTTCCAACAACATAACTCTCCCTTCTCCGTTACTTTCACTCAAACCCTTCTTTTCCGTTA AATCTCTCTCTCTCCGTCACCGAACTCTTCGTTTCGTCGCCAAATCCACCACTAGCCACAGAGACCATGACCATCACCATGACCATCATGAACATCATCA TGACCACCATGGACATCATCATGACCATCACCATCACCACCACCACCATCATCATTCGCACGGAATCGACAGTGCGAATCTGACGGGACCACAGAGGGCG GTTATTGGTTTCGCGAAAGCCAGCAGATGGATGGAGTTGGCTGACTTCCTAAGAGAGCATTTGCATCTTTGCTGCTTTTCAACTGCCTTGTTTGTGACTG CTGCTATTTGTCCTTATGCCTTGCCTAAGCATCTCATCAAACCCTTTCAAAATTCTCTCATTTTCGTTGCGTTTCCTTTCGTTGGGGTTTCTGCTTCACT TGATGCTCTTATTGAGATTAGTAGTGGAAAAGTGAACATCCATGTGTTAATGGCAATGGCAGCCTTTGCGTCAGTTTTTATGGGAAACGCGTTGGAAGGA GGCTTACTTCTTGCCATGTTTAATCTCGCACATATAGCTGAGGAGTATTTTACCGGTCGTTCAATGATTGATGTTAAGGAATTGAAGGAAAACAATCCGG ATTTTGCCCTTGTTCTGGATACGATTGATGGTAAACTAGCTAATACCATTGACTTGGCATACAAGAGGGTTCCCGTGCATGATGTGACTGTAGGATCATA TGTCTTGGTTGGTGCTGGTGAGGTATGTTTTTTTAAATTTGATGCCTTGCAATATCTACAAATTTTGAATTGGTTGAACTTAATTATAATTTCCTTCAAA TTCTAGAAGGTAAAACGGTGACTGTTGTCTTGTGTTGGATTTTAAAGTTTTAAACTGGCTAAGCAGTTTTTACTGCAACCATAAGCTAGACTTTTTAACA GTTTGTGGAGGCTCAGATATAGACCCTTGCATATAGTGTGCTGTATTATAAATTTATGACTATTTTTTAATATATAAAATTATTGATGTCCAAAGGTAAA ATGAAATATACTTTATCTTGTGTGCACAATAATATTGAAATATTTTGAACATGATACTTTTAGTAGAATATATCATCCTTCTTTTATACAAATGAGTATA TCAAGTATGTAACCTGCATCAAACTAAGCTGTAAAATCAATTTGGTAATAGAAATGCTTTTCATGGCAATAATCCTTTCTAAGGACATCAATTTTCAAAT TTTGTATATGGGTGTCCATTATGGCTTTTGCTTGACATTTTATATTAGAGATATCAGTAAGATTTGAAAACATAACAGATAGATATAAAGACGAACTTGT ACAATTTGAGTTTCAAGTCTTATTATACAGCAGACATTGAAGTATAATGGGGATGTATTGTGATTAGACTGTGCCTGTAGATTGTGAAGTTTTCCAAGGT GGTGCCACCATTACCATTGAACACTTGACAGGGGAAGTCAAACCATTGGAGGCCAAAGTTGGAGATAGAATTCCCGGTGGTGCAAGGAACTTAGATGGGC GAATAATTGTTAAGGTAACAAAGACATGGAAGGAATCAACTCTCAACAGAATTGTGCAGTTGACTGAGGAAGCTCAGATGAATAAACCTAAACTTGAAAG GTGGCTGGATGAATTTGGTGAACGCTACAGCAAAGTTGTTGTGGTGTTATCAGTTGCTATTGCTGTTATCGGTCCACTTGTATTTAAGTGGCCATTCATT AGTACACCCGCTTGCAGAGGCTCTGTTTACCGAGCCCTAGGACTCATGGTGGCAGCATCACCATGTGCCTTGGCCGTGGCACCATTGGCATATGCTACAG CAATCAGCTCTTGTGCAAGAAAGGGTATATTACTCAAAGGTGGACATGTTCTGGATGCTCTAGCTTCTTGTTACACTATTGCATTTGACAAGACAGGAAC ATTGACGACTGGTGGACTTGTGTTCAAGGCAATTGAGCCCATTTATGGTCATCAAATTAGAAACATATCTAATGTTTCTTCCTGCTGCATTCCCACCTGT GAAAAAGAAGCTCTTGCTGTTGCTTCAGCTATGGAAAAGGGTACTACTCACCCTATTGGAAGGGCTGTGGTTGACCATAGTGAAGGCAAAGACCTCCCAT CTGTTTCCATTGAAAGTTTTGAGTACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACGGCATTCAGTCAGGAACTGGTGGGGATAAAGTATTGAAAGC AACACTTGGGTCTGTAGATTTCATCACTTCATTTTGTCAATCTGAAGATGAGTCAAAAAAGATAAAGGAAGCTGTTAATACATCTTCTTATGGAAGTGAT TTTGTTCATGCTGCCCTTTCGGTTAACCAGAAGGTAACATTGATTCACCTAGAGGATAGACCTCGTCCGGGGGTTGTTGATGTTATTCAAGAATTGCAAG AAGCAAAATTTCGTGTGATGATGTTAACTGGTGATCACGAGCCTAGTGCTAGGAGAGTTGCTAGCGCTGTAGGTATCAATGAGTTTTACTGCAACCTGAA GCCTGAAGATAAACTGAGCCATGTAAAGGACATCGCAAGAGATATGGGGGGAGGCTTAATTATGGTTGGTGAAGGTATCAATGATGCCCCAGCACTTGCA GCTGCAACTGTAGGGATTGTGCTTGCTCATCGTGCTAGTGCCACTGCCATCGCTGTTGCAGATGTATTGTTGCTTCGAGAAAATATTTCTGCAGTGCCAT TCTGTATTGCCAAGTCCCGCCAAACAACTTCACTGATTAAACAAAATGTGGCTCTGGCATTATCCTGCATCGTCATGGCTGCTCTTCCATCTGTTTTGGG ATATCTTCCTTTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCCTGCTTGTGTGCCTCAATTCGATACGTGGTTTAAATGAACCATCTTGGTCCTGG AATCATGATATATTACAATTGATTAGCTGGGTTAATTCTAGATTACAGTCTCTCAGGACAAATATCAATAGCAAAAGCAGCATCACAACTGCAAATTTGT AAGTTACAGTCATATGAAGTAGAGTATTTTGCTTATCTGTATTCTGTTTATTTCAACAAACAAACCTTAGTTTCATTGCATATGTGTATTTGATGCTATA CATAGTTGGTTCTATTCCCGAATAAAATGTGTAGACTTTGTCAAATCTTTATGATGTACGTTTATCTATCGAGAAAAATGTTAATACCCCTTGTATATCT ATAGGCATTTTTCTCATAGCTAATGGAACATTGCCTATTATTTTATGCTAGTCTCCCTATTTTTTAA
• Tissue: flowers
• Gene name: LI_gene_18948;
• Additional information: details;

Expression of Ll_transcript_198913

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0.1
• LF2: 0.2
• LF3: 0.2
• LF4: 0
• UF1: 0
• UF2: 0.1
• UF3: 0.2
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_198913

• Blastp: Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 79.78% of identity
• Blastx: Probable cadmium/zinc-transporting ATPase HMA1, chloroplastic from Arabidopsis with 80.19% of identity
• Eggnog: p-type ATPase(COG2217)
• Kegg: Link to kegg annotations (AT4G37270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434685.1)
• Pfam: E1-E2 ATPase (PF00122.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;